Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20a08
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   4.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.4  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   5.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   9.4  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 207 TTVTFPPPPHSDVTVAV-HVFLFTHLIMSPSTVGVYCSLGRLAR 79
           T VT   P H+D TVAV  V+    +I +   + V  +L R  R
Sbjct: 63  TEVTITAPGHTDSTVAVIIVYCVLFVIAAGGNLSVVITLFRSRR 106


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 282 AIVQ*FYSYNVTSAKKLMAPYVVRLTTVTFPPPPHSDVTVA 160
           A+   F S   +SA   +A Y +      FPP P+S    A
Sbjct: 596 AVANSFKSEQFSSAAAAVANYALGTFKSDFPPIPNSSAAAA 636


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/35 (28%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
 Frame = +1

Query: 364 THYQHENREEYSRLNA---GIRESNKALL*HNITN 459
           TH+QH+++++  +L+A   GI ++ + +  +N+ N
Sbjct: 736 THHQHQHQQQQQQLSADPNGIVDAPQVISYNNMNN 770


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 325 FVLKSLGTRCIYETH 369
           F+L + GTRC+  TH
Sbjct: 283 FLLYNTGTRCVQSTH 297


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 219 RTGPLISSPMSRYSYKITAQSRTYVNFLMRLPHSKLC 329
           RT P +    S Y   +  + RTYV  +  LP+  LC
Sbjct: 698 RTQPRLMDLDSIYCKLLYNRGRTYVPLVEALPNQFLC 734


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 382 NREEYSRLNAGIRESNKALL 441
           +REEY R  A IRE N  LL
Sbjct: 101 HREEYRRDMALIREENTKLL 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,961
Number of Sequences: 2352
Number of extensions: 13467
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)