Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20a08
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07517-1|AAA35866.1|  169|Homo sapiens mucin protein.                  33   0.99 
AB040901-1|BAA95992.1|  985|Homo sapiens KIAA1468 protein protein.     33   1.3  
AK096772-1|BAC04860.1|  577|Homo sapiens protein ( Homo sapiens ...    32   1.7  
L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.                  31   4.0  
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot...    31   4.0  

>L07517-1|AAA35866.1|  169|Homo sapiens mucin protein.
          Length = 169

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 207 TTVTFPPPPHSDVTVAVHVFLFTHLIMSPST 115
           TT T+P P H + T+  HV  F+  +++PST
Sbjct: 38  TTTTYPTPSHPETTLPTHVPPFSTSLVTPST 68


>AB040901-1|BAA95992.1|  985|Homo sapiens KIAA1468 protein protein.
          Length = 985

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 337 SLGTRCIYETHYQHENREEYSRLNAGIRESNKALL 441
           SL T+C+  THY H  +EE  +L  G  E    LL
Sbjct: 673 SLNTKCVSYTHYTHSLKEEDRKLLVGFLEDVMTLL 707


>AK096772-1|BAC04860.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39453 fis, clone PROST2010046, highly similar to
           Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
          Length = 577

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 207 TTVTFPPPPHSDVTVAVHVFLFTHLIMSPST 115
           TT T+P P H   T+  HV  F+  +++PST
Sbjct: 129 TTTTYPTPSHPQTTLPTHVPPFSTSLVTPST 159


>L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 207 TTVTFPPPPHSDVTVAVHVFLFTHLIMSPST 115
           TT T+P P H   T+  HV  F+   ++PST
Sbjct: 317 TTTTYPTPSHPQTTLTTHVPPFSTSSVTPST 347


>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
          Length = 1569

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 204  TVTFPPPPHSDVTVAVHVFLFTHLIMSPST 115
            T T+P P H + T+  HV  F+  +++PST
Sbjct: 1429 TTTYPTPSHPETTLPTHVPPFSTSLVTPST 1458


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,237,289
Number of Sequences: 237096
Number of extensions: 1762818
Number of successful extensions: 3188
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3188
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)