Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a08
(705 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 4.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 8.6
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 110 YNINYIEQIPVPVPVPVYCGNFPPRPMGPWISIQEQIPRFRHI--GPST 156
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 111 YNINYIEQIPIPVPVPIYCGNFPPRPMGPWISIQEQIPRFRHI--GPST 157
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 113 YNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHI--GPST 159
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 113 YNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHI--GPST 159
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 113 YNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHI--GPST 159
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPPHSD-VTVAVHVFLFTHLIMSPST 115
YN+ +++ P V + FPP P +++ + F H+ PST
Sbjct: 113 YNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHI--GPST 159
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 334 YNIINIEQIPVPVPVPIHCGNFPPRP 359
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 325 YNIINIEQIPVPVPVPIYCGNFPPRP 350
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 336 YNIINIEQIPVPVPVPIYCGNFPPRP 361
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 354 YNIINIEQIPVPVPVPIYCGNFPPRP 379
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 356 YNIINIEQIPVPVPVPIYCGNFPPRP 381
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 114 YNIINIEQIPVPVPVPVYCGNFPPRP 139
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 258 YNVTSAKKLMAPYVVRLTTVTFPPPP 181
YN+ + +++ P V + FPP P
Sbjct: 114 YNIINIEQIPVPVPVPVYCGNFPPRP 139
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 595 MIILNFNYLIYLF 633
MII N N++++LF
Sbjct: 275 MIIANLNFILHLF 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,721
Number of Sequences: 438
Number of extensions: 4217
Number of successful extensions: 31
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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