Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a07
(584 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 33 0.28
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 33 0.28
AE014296-2072|AAF49977.1| 798|Drosophila melanogaster CG17824-P... 30 2.0
AY071175-1|AAL48797.1| 124|Drosophila melanogaster RE22927p pro... 29 4.6
BT011454-1|AAR99112.1| 558|Drosophila melanogaster RE36948p pro... 29 6.1
AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p pro... 29 6.1
AF184229-1|AAD55740.1| 919|Drosophila melanogaster BcDNA.LD2797... 29 6.1
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556... 29 6.1
AE014297-2297|AAF55382.1| 968|Drosophila melanogaster CG5208-PA... 29 6.1
AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA ... 29 6.1
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA... 29 6.1
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 28 8.1
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 28 8.1
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 28 8.1
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 184 KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 345
+ D D DD +++D E T +D + Q LE ER H+PPS+A+
Sbjct: 1968 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 2023
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 184 KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 345
+ D D DD +++D E T +D + Q LE ER H+PPS+A+
Sbjct: 1911 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 1966
>AE014296-2072|AAF49977.1| 798|Drosophila melanogaster CG17824-PA
protein.
Length = 798
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 540 GDRRSGRGGQHRCRVVSFRHRWFRCRSARLREFDPRLGPMEGRLSC 403
G+ RS G H V S +W R R +F+P LG + SC
Sbjct: 196 GESRSVVGSCHSYEVCSDNGQWIRRRCQEREQFEPMLGCVPSDGSC 241
>AY071175-1|AAL48797.1| 124|Drosophila melanogaster RE22927p
protein.
Length = 124
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 243 PGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGPH 362
PGG +G SS + ++ G G+++++GT A G H
Sbjct: 82 PGGGSGIGSSMSNMQYNGSGSYSKNGTVAMHNYYVKNGHH 121
>BT011454-1|AAR99112.1| 558|Drosophila melanogaster RE36948p
protein.
Length = 558
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 365 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 457
P N+P + Q P++Q+ P P G N R L
Sbjct: 338 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 368
>AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p
protein.
Length = 538
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/119 (24%), Positives = 47/119 (39%)
Frame = +3
Query: 213 RASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGPHGXXXXXXXXX 392
R SRS + TR G +G+ S G + +RSG+ + R G
Sbjct: 421 RQSRSRSRTRSGSSSGSGSGSGSRASSRSKSGSRSGSGSRSRTNSPAGSQKSGSRSRSVS 480
Query: 393 XXXXXXXAPPSARAEGRTPEA*RSDTGTTDA*SSRPDTGAGPRARSACPRETCGAQSGA 569
+ +R+ R+ RS +G+ SR + R+RS P + G+ SG+
Sbjct: 481 RSRSRSKSGSRSRSRSRSKSGSRSRSGSRSGSGSRSPS----RSRSGSPSGS-GSSSGS 534
>AF184229-1|AAD55740.1| 919|Drosophila melanogaster BcDNA.LD27979
protein.
Length = 919
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 365 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 457
P N+P + Q P++Q+ P P G N R L
Sbjct: 289 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 319
>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 199 STDDFEHLDRET---KQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEK 348
S+ D E+L ++ ++DP PV V TQ LE+E P + H ++ K
Sbjct: 449 SSVDLENLQKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVK 501
>AE014297-2297|AAF55382.1| 968|Drosophila melanogaster CG5208-PA
protein.
Length = 968
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 365 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 457
P N+P + Q P++Q+ P P G N R L
Sbjct: 338 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 368
>AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA
protein.
Length = 538
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/119 (24%), Positives = 47/119 (39%)
Frame = +3
Query: 213 RASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGPHGXXXXXXXXX 392
R SRS + TR G +G+ S G + +RSG+ + R G
Sbjct: 421 RQSRSRSRTRSGSSSGSGSGSGSRASSRSKSGSRSGSGSRSRTNSPAGSQKSGSRSRSVS 480
Query: 393 XXXXXXXAPPSARAEGRTPEA*RSDTGTTDA*SSRPDTGAGPRARSACPRETCGAQSGA 569
+ +R+ R+ RS +G+ SR + R+RS P + G+ SG+
Sbjct: 481 RSRSRSKSGSRSRSRSRSKSGSRSRSGSRSGSGSRSPS----RSRSGSPSGS-GSSSGS 534
>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 199 STDDFEHLDRET---KQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEK 348
S+ D E+L ++ ++DP PV V TQ LE+E P + H ++ K
Sbjct: 449 SSVDLENLQKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVK 501
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 193 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 357
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3282 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3334
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 193 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 357
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3282 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3334
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
Length = 3575
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 193 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 357
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3283 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3335
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,726,537
Number of Sequences: 53049
Number of extensions: 569776
Number of successful extensions: 2349
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2347
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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