Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a06
(732 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11138 Cluster: Trans-activating transcriptional regula... 424 e-118
UniRef50_P41716 Cluster: Trans-activating transcriptional regula... 79 1e-13
UniRef50_A0C9F0 Cluster: Chromosome undetermined scaffold_16, wh... 40 0.083
UniRef50_Q6C054 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 37 0.44
UniRef50_Q2BAU2 Cluster: Subtilisin-type proteinase; n=1; Bacill... 36 0.77
UniRef50_Q555X5 Cluster: MIZ type Zn finger-containing protein; ... 36 0.77
UniRef50_Q3ASY8 Cluster: Parallel beta-helix repeat; n=4; cellul... 36 1.0
UniRef50_UPI00015B4581 Cluster: PREDICTED: hypothetical protein;... 35 1.8
UniRef50_UPI000065CDA5 Cluster: Homolog of Gallus gallus "Versic... 35 1.8
UniRef50_A3GGQ0 Cluster: Putative uncharacterized protein; n=2; ... 35 1.8
UniRef50_A3GG34 Cluster: Sporulation protein involved in sister ... 35 1.8
UniRef50_UPI0000498CEC Cluster: hypothetical protein 161.t00005;... 35 2.4
UniRef50_Q839R5 Cluster: Cell wall surface anchor family protein... 35 2.4
UniRef50_Q8I255 Cluster: Putative uncharacterized protein PFA043... 35 2.4
UniRef50_Q24HL5 Cluster: Response regulator receiver domain cont... 34 3.1
UniRef50_A5K9F0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q6CW84 Cluster: Similarities with sgd|S0004329 Saccharo... 34 3.1
UniRef50_Q32836 Cluster: Protein ycf2; n=1; Pelargonium x hortor... 34 3.1
UniRef50_Q55CQ4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A0EYQ9 Cluster: Immediately early 1; n=1; Ecotropis obl... 33 5.5
UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P... 33 5.5
UniRef50_Q550V6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_Q6VBJ3 Cluster: Epa4p; n=6; Fungi/Metazoa group|Rep: Ep... 33 5.5
UniRef50_Q08XP5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A6CFN2 Cluster: Beta-lactamase; n=1; Planctomyces maris... 33 7.2
UniRef50_Q232N7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q1RLB9 Cluster: Transcription factor protein; n=2; Cion... 33 7.2
UniRef50_Q1RL92 Cluster: Zinc finger protein; n=1; Ciona intesti... 33 7.2
UniRef50_A2FUE7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_UPI00006D0109 Cluster: hypothetical protein TTHERM_0082... 33 9.5
UniRef50_Q830Q9 Cluster: Cell wall surface anchor family protein... 33 9.5
UniRef50_Q1FLJ7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A5FF77 Cluster: TonB-dependent receptor precursor; n=1;... 33 9.5
UniRef50_Q869L1 Cluster: Similar to Dictyostelium discoideum (Sl... 33 9.5
UniRef50_Q54T92 Cluster: Rab GTPase domain-containing protein; n... 33 9.5
UniRef50_Q6BKB1 Cluster: Similar to CA4481|IPF9150 Candida albic... 33 9.5
UniRef50_A5E7A6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q8VQ99 Cluster: Serine-rich adhesin for platelets precu... 33 9.5
UniRef50_Q08225 Cluster: Probable dipeptidyl-peptidase 3; n=5; S... 33 9.5
>UniRef50_P11138 Cluster: Trans-activating transcriptional
regulatory protein; n=11; Nucleopolyhedrovirus|Rep:
Trans-activating transcriptional regulatory protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 582
Score = 424 bits (1045), Expect = e-118
Identities = 204/232 (87%), Positives = 211/232 (90%)
Frame = +2
Query: 35 MTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAA 214
MTQINFNASYTSA TPSRASFDN YSEFCDKQ PNDYL+YYN+PTPDGADTV+SDSETAA
Sbjct: 1 MTQINFNASYTSASTPSRASFDNSYSEFCDKQ-PNDYLSYYNHPTPDGADTVISDSETAA 59
Query: 215 ASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNAESF 394
ASNFLASVNSLTD ND++ECLLKTTDNL EAVSSAYYSESLE PV EQPSPSSAY+AESF
Sbjct: 60 ASNFLASVNSLTD-NDLVECLLKTTDNLEEAVSSAYYSESLEQPVVEQPSPSSAYHAESF 118
Query: 395 EQSVGVNQPSAAGTKRKLDEYLDDSQSVVGQFNXXXXXXXXXXSTIQSCATLEQTINHNT 574
E S GVNQPSA GTKRKLDEYLD+SQ VVGQFN STIQSCATLEQTINHNT
Sbjct: 119 EHSAGVNQPSATGTKRKLDEYLDNSQGVVGQFNKIKLRPKYKKSTIQSCATLEQTINHNT 178
Query: 575 NICTVASTQEITHYFTNDFAPYLMRFDDNDYNSNRFSDHMSETGYYMFVVKK 730
NICTVASTQEITHYFTNDFAPYLMRFDDNDYNSNRFSDHMSETGYYMFVVKK
Sbjct: 179 NICTVASTQEITHYFTNDFAPYLMRFDDNDYNSNRFSDHMSETGYYMFVVKK 230
>UniRef50_P41716 Cluster: Trans-activating transcriptional
regulatory protein; n=11; Nucleopolyhedrovirus|Rep:
Trans-activating transcriptional regulatory protein -
Choristoneura fumiferana nuclear polyhedrosis virus
(CfMNPV)
Length = 560
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 524 STIQSCATLEQTINHNTNICTVASTQEITHYFTNDFAPYL-MRFDDNDYNSNRFSDHMSE 700
+TIQ+ +L + N+NT ICTVA T +I YF +DF+ YL + D ++NRFSD++SE
Sbjct: 143 ATIQNKTSLTEECNYNTEICTVAPTDQIAEYFKHDFSVYLEKQKSDCQMSANRFSDYISE 202
Query: 701 TGYYMFVVKK 730
TGYY+FVVKK
Sbjct: 203 TGYYVFVVKK 212
>UniRef50_A0C9F0 Cluster: Chromosome undetermined scaffold_16, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_16, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1580
Score = 39.5 bits (88), Expect = 0.083
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 545 TLEQTINHNTNICTVASTQEITHYFTNDFAPYLMRFDDNDYNSNRFSDHMSETGYYMFVV 724
TL +TI ++ + ++T + ND P + F+ N YNS + H+S+ YY ++
Sbjct: 1122 TLSETIEQLISVAIKLNNSDLTEF--NDLNPLIFYFEFNSYNSLALAQHISQNYYYYNIL 1179
Query: 725 KK 730
K
Sbjct: 1180 SK 1181
>UniRef50_Q6C054 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 331
Score = 37.1 bits (82), Expect = 0.44
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +2
Query: 65 TSAPTPSRAS--FDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASV 238
+ +P+P S FD S D P D +NP D+ ++D+E + + V
Sbjct: 4 SESPSPGHDSDTFDRNGSPLSDVSSPADTNTSASNPAHPTDDSSLTDTEASLKAQLAGFV 63
Query: 239 NSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNAESFEQSVGVNQ 418
L DD +I + + + +++A + + A + S A + S+ V
Sbjct: 64 EGLVDDTNITDTNTCSATVVAPLITAAPTTTTTTTITATASTTVSTTTAAT--TSIAVGA 121
Query: 419 PSAAG 433
PSA+G
Sbjct: 122 PSASG 126
>UniRef50_Q2BAU2 Cluster: Subtilisin-type proteinase; n=1; Bacillus
sp. NRRL B-14911|Rep: Subtilisin-type proteinase -
Bacillus sp. NRRL B-14911
Length = 447
Score = 36.3 bits (80), Expect = 0.77
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +2
Query: 77 TPSRASFDNGYSEFCDKQQPNDYL--NYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 250
T +A F N Y + D P Y+ Y+ N + T ++ A + + SVN
Sbjct: 348 TGEKADFSN-YGYYIDVTAPGVYIPSTYFKNQYAALSGTSMASPHVAGLAGLILSVNPDL 406
Query: 251 DDNDIMECLLKTTDNLGEAVSSAYYSESL 337
+ ++M + T ++GE AY+ L
Sbjct: 407 SNREVMNIIKGTARDIGEEGRDAYFGNGL 435
>UniRef50_Q555X5 Cluster: MIZ type Zn finger-containing protein;
n=3; Dictyostelium discoideum|Rep: MIZ type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 834
Score = 36.3 bits (80), Expect = 0.77
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Frame = +2
Query: 20 NNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNY------YNNPTPDGA 181
N+ TT T N N++Y S+ S ++ + Y+ + N+Y NY YNN +
Sbjct: 153 NSTTTTTTTNNNSNYNSSNNNSNSNNNFNYNNNNNNYNNNNYNNYNNYNNNYNNNNYNYN 212
Query: 182 DTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLE----LPV 349
++ S+ A++NF V L + TDN+ E Y ++++
Sbjct: 213 GSINSEHHNQASNNFQLQVQKLNGG------INNFTDNVQE--PPRQYKDTMQNITRFIF 264
Query: 350 AEQPSPSSAYNAESFEQSVGVNQPS 424
Q SS YN S ++ + +N S
Sbjct: 265 TMQNKSSSDYNNPSVQKKLQLNDSS 289
>UniRef50_Q3ASY8 Cluster: Parallel beta-helix repeat; n=4; cellular
organisms|Rep: Parallel beta-helix repeat - Chlorobium
chlorochromatii (strain CaD3)
Length = 36805
Score = 35.9 bits (79), Expect = 1.0
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Frame = +2
Query: 176 GADTVVSDSETAAASNFLASVNSLTD---------DNDIMECLLKTTDNLGEAVSSAYYS 328
G VV D T + + +A+ S+TD DNDI L+ G +S +
Sbjct: 32044 GTSVVVGDITTGGSVSVIATTGSITDADSADETTADNDIQAVGLRLWAKSGIGTNSNHLD 32103
Query: 329 ESLELPVAEQPSPSSAYNAES---FEQSVGV--NQPSAAGTKRKLDEYLDDSQS 475
S++ ++ S Y ES QSVGV N+ AAGT +DE D +QS
Sbjct: 32104 TSVD-NLSAYVDAGSMYLLESNGVTVQSVGVSVNRVVAAGTASVVDETTDSAQS 32156
>UniRef50_UPI00015B4581 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 607
Score = 35.1 bits (77), Expect = 1.8
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Frame = +2
Query: 53 NASYTSAPTPSRASFDN----GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAAS 220
NA T+A T S ++ + G S ++ + ++ +++ + D + + +
Sbjct: 457 NAGTTTATTTSSSNICSNSTAGSSSTAAAEKSSAFIKAFDSKIKELVDVLAAQFISCFEQ 516
Query: 221 NFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNAESFEQ 400
+ N N++ LLK N + V+ A + E+P+ + P PSS NA E+
Sbjct: 517 QKVLLQNCFAKQNEL---LLKIQTN--DLVNDAAQDDEDEVPLPDNPQPSSPRNAPVVEE 571
Query: 401 SVGVNQPSAAGTKRK-LDEYLDD 466
+ +A+GT L+++ DD
Sbjct: 572 ESEETEYTASGTVESFLEDHGDD 594
>UniRef50_UPI000065CDA5 Cluster: Homolog of Gallus gallus "Versican
core protein precursor (Large fibroblast proteoglycan)
(Chondroitin sulfate proteoglycan core protein 2)
(PG-M).; n=1; Takifugu rubripes|Rep: Homolog of Gallus
gallus "Versican core protein precursor (Large
fibroblast proteoglycan) (Chondroitin sulfate
proteoglycan core protein 2) (PG-M). - Takifugu rubripes
Length = 2108
Score = 35.1 bits (77), Expect = 1.8
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +2
Query: 173 DGADTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVA 352
DG+ V D T ++S A +T+ + ++ TTD L + ++LP++
Sbjct: 46 DGSGEQVQDLLTQSSSVTFAPSVDITEKSGLIPT--GTTDTLD--------LDKMKLPLS 95
Query: 353 EQPSPSSAYNAESFEQSVGVNQPSAAGTKRKLDEYLDD 466
EQPS A +AES SV V+ AGT + + DD
Sbjct: 96 EQPSVPPA-SAESISSSVTVSPSVDAGTSSSVSHFEDD 132
>UniRef50_A3GGQ0 Cluster: Putative uncharacterized protein; n=2;
Pichia stipitis|Rep: Putative uncharacterized protein -
Pichia stipitis (Yeast)
Length = 257
Score = 35.1 bits (77), Expect = 1.8
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Frame = +2
Query: 59 SYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASV 238
S TS T S A + + S CD QQ D +N TP+G+D S A L V
Sbjct: 19 SATSTDTASAAFYSSSSS--CDSQQCLDAVNAQQQCTPEGSDNSESVEPQVIACLCLLGV 76
Query: 239 NSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNA-ESFEQS 403
D C + G+ + Y +E +A PS ++ ESF S
Sbjct: 77 EEYWDKLAACTCDSEGEPKSGQELKVFYCNELEASGLASATHPSDPISSTESFLNS 132
>UniRef50_A3GG34 Cluster: Sporulation protein involved in sister
chromatid cohesion; n=2; Pichia stipitis|Rep:
Sporulation protein involved in sister chromatid
cohesion - Pichia stipitis (Yeast)
Length = 618
Score = 35.1 bits (77), Expect = 1.8
Identities = 31/115 (26%), Positives = 46/115 (40%)
Frame = +2
Query: 137 NDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSS 316
N +NY D +D + + +N + VN L D D+ L + D L E +
Sbjct: 200 NRSINYSTITQEDVQFEFNNDGDIVSTNNNIEEVNDLLVDLDLENNNL-SQDILEERQDN 258
Query: 317 AYYSESLELPVAEQPSPSSAYNAESFEQSVGVNQPSAAGTKRKLDEYLDDSQSVV 481
+ V+EQ S SS+ + S+ GTKRKL L D S +
Sbjct: 259 LNITNDPHFLVSEQQSNSSSPSVAQEPSSIVTCTTKVTGTKRKLQRLLVDEISQI 313
>UniRef50_UPI0000498CEC Cluster: hypothetical protein 161.t00005;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 161.t00005 - Entamoeba histolytica HM-1:IMSS
Length = 324
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 215 ASNFLASVNSLTDDNDIMECLLK--TTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNAE 388
A+N++ +++ DD ++ K T + L A+ A +E + L + SPSSA +
Sbjct: 222 ANNYILVFDTIGDDIVLLSSTSKHNTNNQLNNAIEDAAEAEGIPLTKSSCSSPSSALLSH 281
Query: 389 SFEQSV 406
SFE SV
Sbjct: 282 SFETSV 287
>UniRef50_Q839R5 Cluster: Cell wall surface anchor family protein;
n=1; Enterococcus faecalis|Rep: Cell wall surface anchor
family protein - Enterococcus faecalis (Streptococcus
faecalis)
Length = 1055
Score = 34.7 bits (76), Expect = 2.4
Identities = 31/133 (23%), Positives = 60/133 (45%)
Frame = +2
Query: 20 NNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSD 199
+ +T + + ++S + + TPS S + SE ++ N + TP S
Sbjct: 865 SESSTPSTTSESSSTSESNTPSTTSETSSTSESSTSSTTSETSNTNESNTPSTTSKTSST 924
Query: 200 SETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAY 379
SE++A+S A+ N T ++ + +++ + G+ S Y ES + P Q + +
Sbjct: 925 SESSASSTTSATNN--TSESSTPSTVNESSQSKGQN-SVIYAVESNQDPNDAQSNSKPSA 981
Query: 380 NAESFEQSVGVNQ 418
A ++SV NQ
Sbjct: 982 KASQTKESVAENQ 994
>UniRef50_Q8I255 Cluster: Putative uncharacterized protein PFA0430c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFA0430c - Plasmodium falciparum
(isolate 3D7)
Length = 1152
Score = 34.7 bits (76), Expect = 2.4
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 7/227 (3%)
Frame = +2
Query: 17 VNNQTTMTQINFNASYTSAPTPSRASFD-NGYSEFCDKQQPNDYLNYYNNPTPDGADTVV 193
+NN IN N +Y S +++D N +F K + DY + N DG +
Sbjct: 790 MNNNNMGVHINMNNNYLSNKYKHNSAYDENNVQDFLQKSKKQDY-GHVTNTLKDGKQMIY 848
Query: 194 S--DSETAAASNFLASVNSLTD-DNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPS 364
+ D N+ + +D N + ++L + + + Y + + +
Sbjct: 849 NNMDPNNKKDDNYFKKMMRDSDLSNYNGRKSMYLNESLEDDMKNNDYDNKINNKNFDYAN 908
Query: 365 PSSAYNAESFEQSVG-VNQPSAAGTKRKLDEYLD-DSQSVVGQFNXXXXXXXXXXSTIQS 538
+S Y E E G N+ + K+K + ++ D++ ++ N +
Sbjct: 909 NNSTYIVEGKEIQQGEKNKTNDMDEKKKDESFIHYDNKKIINNLNPFSPLNDYNNISNNK 968
Query: 539 CATLEQTINHNTNICTVASTQEITHYFTNDFAPYLMRFDDND-YNSN 676
T+ + N+N N V + I + + N + RF YN++
Sbjct: 969 KNTINEEQNNNVNESDVIT--YIANSYINKPPSNINRFSQTSIYNTH 1013
>UniRef50_Q24HL5 Cluster: Response regulator receiver domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Response regulator receiver domain containing
protein - Tetrahymena thermophila SB210
Length = 1082
Score = 34.3 bits (75), Expect = 3.1
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 14 IVNNQTTMTQINFNA----SYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGA 181
++NNQT + Q N ++ S + SF EFC+++ D+LN YNN
Sbjct: 201 LINNQTDVKQNNIHSIGLQQKDSIFNQNPLSFRK---EFCNQKFQKDFLNIYNNDLELIL 257
Query: 182 DT-VVSDSETAAASNFLASVNSLTDDNDIMECLLKTTD 292
D ++ D + + LA N I++ LLK D
Sbjct: 258 DQFMICDQKNKSLKEVLAERYQPESYNKIIQLLLKKLD 295
>UniRef50_A5K9F0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1926
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 578 ICTVASTQEITHYFTNDFAPYLMRFDDNDYNSNRFSDHMSETGYY 712
I T + +EI +YF N + YL RFD + +F+D +S +Y
Sbjct: 919 ILTKKNREEIAYYFLNYYTKYLFRFDLPNNVVIKFTDRISGLSFY 963
>UniRef50_Q6CW84 Cluster: Similarities with sgd|S0004329
Saccharomyces cerevisiae YLR337c VRP1 verprolin; n=1;
Kluyveromyces lactis|Rep: Similarities with sgd|S0004329
Saccharomyces cerevisiae YLR337c VRP1 verprolin -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 589
Score = 34.3 bits (75), Expect = 3.1
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 155 YNNPT-PDGADTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSE 331
+N PT P + + S A FLAS+ S DD+ I+E T + +
Sbjct: 395 FNAPTLPQSTPSSEAPSIPAGGLPFLASIQSRRDDSHIIESENSHTPVGAPTAPPSPPPQ 454
Query: 332 SLELPVAEQPSPSSAYNAESFEQS 403
+ P A+ P P A + ES +Q+
Sbjct: 455 AASFPSAKAPPPPPAASEESLQQN 478
>UniRef50_Q32836 Cluster: Protein ycf2; n=1; Pelargonium x
hortorum|Rep: Protein ycf2 - Pelargonium hortorum (Common
geranium)
Length = 2110
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 448 QLPFSSSCRWLVHTNRLLKRFRIISRTGRWLLRNRQLKGFRIISRTNCFSEIISGLEQTF 269
+LPFS++C W + R + F + RWL N L S+T E L F
Sbjct: 2002 RLPFSTTCHWFI-KKRQERHFEFLIHRERWLRTNSSLSNGFFCSKTQTLFESYQYLSNLF 2060
>UniRef50_Q55CQ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 794
Score = 33.9 bits (74), Expect = 4.1
Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 10/164 (6%)
Frame = +2
Query: 8 DTIVNNQTTMTQINFNASY-TSAPTPSRASFDNG--YSEFCDKQQPNDYLNYYNNPTPDG 178
++I+N+ T I + + T AP PS + F Y + C YLN N G
Sbjct: 190 ESIINDGTNEFDIYCSTTVPTPAPLPSPSQFTRFLLYGDSCPDS--GQYLNISNCQNTCG 247
Query: 179 ADTVVSDSETAAASNFLASVNSLTD-------DNDIMECLLKTTDNLGEAVSSAYYSESL 337
D V FL + +LTD ND+ +C T+++ + +
Sbjct: 248 TDLVSISPNPTVTDGFLVNFYNLTDTLCKTPIGNDVFQCQNNDTESI-ISDGDNDFELYC 306
Query: 338 ELPVAEQPSPSSAYNAESFEQSVGVNQPSAAGTKRKLDEYLDDS 469
E P P P+ + P+ A +K E L D+
Sbjct: 307 EYPATLSPLPTKTPSPTPSPTQSPTPSPTPAPSKYNEFELLGDN 350
>UniRef50_A0EYQ9 Cluster: Immediately early 1; n=1; Ecotropis
obliqua NPV|Rep: Immediately early 1 - Ecotropis obliqua
NPV
Length = 721
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 659 NDYNSNRFSDHMSETGYYMFVVKK 730
++ N RF+D+M+ T YYMFVV K
Sbjct: 330 DESNDKRFADYMTSTSYYMFVVCK 353
>UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P1.39;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL13P1.39 - Plasmodium
falciparum (isolate 3D7)
Length = 6088
Score = 33.5 bits (73), Expect = 5.5
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 8 DTIVNNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYY---NNPTPDG 178
+T++ N TT T+ N N + + S +S +N S + N+Y NYY NN +
Sbjct: 5516 NTVLVNTTTTTKNN-NNNNNNNNNNSGSSNNNNNSGSSNNNNNNNYYNYYYNNNNCVVNQ 5574
Query: 179 ADTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLE 340
+ +S +E ++ L D DI++ L ++ +G+ + +SLE
Sbjct: 5575 NEEDISINENKWIFLGYENLEHLNDVYDILKILFESYTQIGKNLKRYNDIDSLE 5628
>UniRef50_Q550V6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 678
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +2
Query: 65 TSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNS 244
T+A S +SF N + + N+Y N NN T T S + T+ S + +NS
Sbjct: 393 TTANVSSNSSFSNNNNTSTNNNTNNNYNNNTNNTT----TTTTSSTTTSMLSKLTSKLNS 448
Query: 245 LTDDNDIMECLLKTTDNLGEAVSS 316
+ + N + T N S+
Sbjct: 449 VINKNSTPTPITTNTTNTNNTTST 472
>UniRef50_Q6VBJ3 Cluster: Epa4p; n=6; Fungi/Metazoa group|Rep: Epa4p
- Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1416
Score = 33.5 bits (73), Expect = 5.5
Identities = 25/130 (19%), Positives = 61/130 (46%)
Frame = +2
Query: 47 NFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNF 226
+ N+S +S+P+PS +S + S + + ++ + + + S S ++++S+
Sbjct: 328 DINSSSSSSPSPSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSS 386
Query: 227 LASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAYNAESFEQSV 406
+S +S + + ++ + + SS+ S S + PSPSS+ ++ S S
Sbjct: 387 SSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSS 446
Query: 407 GVNQPSAAGT 436
+ S++ +
Sbjct: 447 SSSSSSSSSS 456
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/137 (19%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +2
Query: 20 NNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSD 199
++ ++ + + ++S +S+P+PS +S + S P+ ++ + + + S
Sbjct: 357 SSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSS-----SSSSSSSSSSSSSS 411
Query: 200 SETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELPVAEQPSPSSAY 379
S ++++S+ +S +S + ++ + + SS+ S S + PSPSS+
Sbjct: 412 SSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSS 471
Query: 380 NAESFEQSVGVN-QPSA 427
++ S S + QPS+
Sbjct: 472 SSSSSSSSSSPSIQPSS 488
>UniRef50_Q08XP5 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 390
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 278 LKTTDNLGEAVSSAYYSESLELPVA---EQPSPSSAYNAESFEQSVGVNQPSAAGTKRKL 448
L TD+ G+ +++ + + L LPV+ +P ESFEQ SAAG + +
Sbjct: 96 LSFTDDAGKPLTNVWLARDLTLPVSMETSRPLDVPPRGTESFEQL------SAAGRQWEA 149
Query: 449 DEYLDDSQSVVGQFN 493
Y++D + V G N
Sbjct: 150 KRYIEDQRPVDGPLN 164
>UniRef50_A6CFN2 Cluster: Beta-lactamase; n=1; Planctomyces maris
DSM 8797|Rep: Beta-lactamase - Planctomyces maris DSM
8797
Length = 389
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 170 PDGADTVVSDSETAAASNFLASVNSL-TDDNDIMECLLKTTDNLGEAVSSAYY--SESLE 340
P+ T+ E L+ + + DD ++M+ L + D G+ Y+ ES++
Sbjct: 109 PELKKTMAPGVEKVTLEQLLSHTSGMRADDENLMKLLKDSFDVDGDLNDQRYWLLKESVK 168
Query: 341 LPVAEQPSPSSAYNAESF 394
LP+ +PS + AYN +
Sbjct: 169 LPLVAEPSKAWAYNNRGY 186
>UniRef50_Q232N7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 469
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 23 NQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDS 202
N +++Q+N + S P+ +S N S +++ N+Y+N +NN + A TV D
Sbjct: 341 NFQSISQLNNLSQTYSQLKPALSSIQNNLSPLLIQKKNNNYINNFNNFNSNFASTVFQDD 400
Query: 203 E 205
+
Sbjct: 401 Q 401
>UniRef50_Q1RLB9 Cluster: Transcription factor protein; n=2; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1004
Score = 33.1 bits (72), Expect = 7.2
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Frame = +2
Query: 59 SYTSAPTPSRASFDNGY---SEFCDKQQPNDYL-NYYNNPTPDGADT---VVSDSETAAA 217
SY S+P+ S SFDN Y D Q +L N+ + + + T S +E + A
Sbjct: 842 SYNSSPSSSHGSFDNSYMADQPMSDTQHSEQFLFNHVQSSAAEPSSTSSLTPSSAEYSCA 901
Query: 218 SNF--LASVNSL-TDDNDIMECLLKTTDNLGEAVSSAYYSESL 337
L+S SL D + E TT + EA S+ Y+ +L
Sbjct: 902 QTMSRLSSAESLNAADTAMHEASGSTTPDKEEADHSSEYTNAL 944
>UniRef50_Q1RL92 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1089
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 41 QINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYY-NNPTPDGA 181
Q +S +S P+PS+A++D+ YS+ D + +D+ +Y P +G+
Sbjct: 112 QNRHQSSPSSIPSPSKATYDSKYSQSIDSEVDSDHRSYVAATPNKEGS 159
>UniRef50_A2FUE7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 639
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 272 CLLKTTDNLGEAVSSAYYSESLE----LPVAEQPSPSSAYNAESFEQSVGVNQPSAAGTK 439
CL + LG+A+ S + E +P +E P P S+Y + F S + S T
Sbjct: 556 CLKEELGILGDALCSKPMRQKFESVGIMPPSEDPGPDSSYWKDRFSLSGSSSSDSTITTS 615
Query: 440 RKLDEYLDDSQSVVGQFN 493
++ + S+ ++ FN
Sbjct: 616 SRVFHRFEGSEEILKSFN 633
>UniRef50_UPI00006D0109 Cluster: hypothetical protein TTHERM_00825090;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00825090 - Tetrahymena thermophila SB210
Length = 3927
Score = 32.7 bits (71), Expect = 9.5
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Frame = +2
Query: 20 NNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSD 199
NN + +N + + S+ + N Y K +D N NNP G D +V D
Sbjct: 3392 NNNNQSSDLNIHEMELLDDSASQL-YQNNYQNL--KPLDSDSTNQVNNPNISGGDFIVPD 3448
Query: 200 SETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLE-LPVAEQPSPSSA 376
++ F+ +++L + + ECL + L + + +ES E +PV + S
Sbjct: 3449 AQKGINGGFI-KLSNLINQYNPGECL--SNAPLQKVSPTQSETESNENIPVVQTQS---- 3501
Query: 377 YNAESFEQSVGVNQPSAAGTKRK---LDEY-LDDSQSVVGQFN 493
E + N+P G K L+++ +D ++ + +F+
Sbjct: 3502 -QCLKIEDQMHENEPKQQGVNNKSHYLNKFEIDQEENQIEEFD 3543
>UniRef50_Q830Q9 Cluster: Cell wall surface anchor family protein;
n=1; Enterococcus faecalis|Rep: Cell wall surface anchor
family protein - Enterococcus faecalis (Streptococcus
faecalis)
Length = 255
Score = 32.7 bits (71), Expect = 9.5
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 14 IVNN---QTTMTQIN-FNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGA 181
+VNN QT + IN Y + PS D G + DK + NDY + + +
Sbjct: 132 VVNNLSDQTLVDLINQVKVDYANQNYPSDVRGDYGLAAMADKIKANDYTSINQSAESVSS 191
Query: 182 DTVVSDS--ETAAASNFLASVNSLTD 253
DT ++S +T +S+ A+ +S T+
Sbjct: 192 DTTNTESTLQTTTSSSKKATTSSSTE 217
>UniRef50_Q1FLJ7 Cluster: Putative uncharacterized protein; n=1;
Clostridium phytofermentans ISDg|Rep: Putative
uncharacterized protein - Clostridium phytofermentans
ISDg
Length = 405
Score = 32.7 bits (71), Expect = 9.5
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +2
Query: 68 SAPTPSRASFDNGYSEFCDKQQPND--YLNYYNNPTPDGADTVVSDSETAAASNFLASVN 241
SAP PS ++DN Y E P D Y Y P A T + + ASN N
Sbjct: 224 SAPPPSSMNYDNSYYE-STSPTPYDLLYQAMYGQGPPPDATTNTAGQTVSEASNMQMPGN 282
Query: 242 SLTDDN 259
S T N
Sbjct: 283 SPTSGN 288
>UniRef50_A5FF77 Cluster: TonB-dependent receptor precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: TonB-dependent
receptor precursor - Flavobacterium johnsoniae UW101
Length = 1003
Score = 32.7 bits (71), Expect = 9.5
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 8 DTIVNNQTTMTQINFNASYTSAPTPSRASFDNGYSEFCDKQQPN-DYLNYYNNPTPDGAD 184
+ +V N T ++ + +Y R S +G EF D + N+YNNP P
Sbjct: 414 NNLVGNITAELKLPWGFTYNLNVAHQRLSTSHG--EFYDSYYSRYNSANFYNNPDPPQTK 471
Query: 185 TVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLG 301
T+++ +A NS + N+I+E L LG
Sbjct: 472 TLINFGVNGSALR-----NSYDNTNNIVESFLNWDKTLG 505
>UniRef50_Q869L1 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Adenylyl cyclase; n=4; Eukaryota|Rep: Similar to
Dictyostelium discoideum (Slime mold). Adenylyl cyclase
- Dictyostelium discoideum (Slime mold)
Length = 2053
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 431 QLPMVGSHQQTAQK-IPHYKQNWAMVAPQQAAQGIPNNKQN*LLLRDYQ 288
QL HQQ Q+ IPH++QN + QQ Q +P+ +QN L+ + Q
Sbjct: 212 QLQQQMQHQQMQQQQIPHHQQNQQL--QQQQQQQVPHQQQNQLIQQQQQ 258
>UniRef50_Q54T92 Cluster: Rab GTPase domain-containing protein; n=3;
Dictyostelium discoideum|Rep: Rab GTPase
domain-containing protein - Dictyostelium discoideum AX4
Length = 2107
Score = 32.7 bits (71), Expect = 9.5
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Frame = +2
Query: 5 GDTIVNNQTTMTQINFNA---SYTSAPTPSRASF--DNG---YSEFCDKQQPNDYLNYYN 160
G +I N TT T+ NF S P PSR F NG Y C + N
Sbjct: 682 GSSIGNTPTT-TEENFKRRRHQILSVPFPSRPPFKDSNGRINYYRVCSNEVANSLNTTST 740
Query: 161 NPTPDGADT---VVSDSETAAASNFLASVNSLTDDN 259
+PT DG+ T +S + T + ++V+S ++N
Sbjct: 741 SPTLDGSSTNINTISITTTTTTTTTTSTVSSTNNNN 776
>UniRef50_Q6BKB1 Cluster: Similar to CA4481|IPF9150 Candida albicans
IPF9150; n=2; Saccharomycetales|Rep: Similar to
CA4481|IPF9150 Candida albicans IPF9150 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 522
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/98 (22%), Positives = 43/98 (43%)
Frame = +2
Query: 47 NFNASYTSAPTPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNF 226
NF+A+ P FDN + F + +Q + N TP G +V + S T +++
Sbjct: 77 NFDATLPKEGDPLDIDFDNLPTNFLEAEQATNANNGSQVDTPSGPGSVPNMSVTTNSASM 136
Query: 227 LASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLE 340
AS N+ + + ++ +G + + Y +L+
Sbjct: 137 SASPNNTPRPTPLSKTNSRSETPVGNSSRATYDGTNLK 174
>UniRef50_A5E7A6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 727
Score = 32.7 bits (71), Expect = 9.5
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 GGDTIVNNQTTM-TQINFNASYTSAPTPSRASFDNGYSEFCDKQQPND-YLN-YYNNPTP 172
GG+T NN + N N+SY S+ + S+ + +N +++ D ND + N Y N P
Sbjct: 405 GGNTKNNNNDSNDVDKNTNSSYISSSSSSKKN-NNNNNKYKDNDVDNDTHKNKYQQNQRP 463
Query: 173 DGADTVVSDSETAA---ASNFLASVNSLTD 253
+ D + S A AS+ AS+NS +D
Sbjct: 464 NSPDKLRHKSARRAFEEASSSSASLNSQSD 493
>UniRef50_Q8VQ99 Cluster: Serine-rich adhesin for platelets precursor;
n=34; Staphylococcus|Rep: Serine-rich adhesin for
platelets precursor - Staphylococcus aureus
Length = 2283
Score = 32.7 bits (71), Expect = 9.5
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +2
Query: 173 DGADTVVSDSETAAASN--FLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSESLELP 346
+ T VSDS++++ASN F + S ++ + + + +S S+S+
Sbjct: 1881 ESTSTSVSDSQSSSASNSQFDSMSISASESDSVSTSDSSSISGSNSTSTSLSTSDSMSGS 1940
Query: 347 VAEQPSPSSAYNAESFEQSVGVNQPSAAGTKRKLDEYLDDSQSVVGQFNXXXXXXXXXXS 526
V+ S S ++S S+ V+ S+ T L + + SQS +
Sbjct: 1941 VSVSTSTSL---SDSISGSISVSDSSSTSTSESLSDSMAQSQSTSTSASGSLSTSISTSM 1997
Query: 527 TIQSCATLEQTINHNTNICTVASTQEIT 610
++ + + Q+ + +T++ T S + T
Sbjct: 1998 SMSASTSTSQSTSVSTSLSTSDSISDST 2025
>UniRef50_Q08225 Cluster: Probable dipeptidyl-peptidase 3; n=5;
Saccharomycetales|Rep: Probable dipeptidyl-peptidase 3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 711
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 155 YNNPTPDGADTVVSDSETAAASNFLASVNSLTDDNDIMECLLKTTDNLGEAVSSAYYSES 334
Y P + D + T S A +N D+ ++ K +LG +S+A S S
Sbjct: 372 YEKPIFNPPDFTSLEVLTFTGSGIPAGINIPNYDDVRLKIGFKNV-SLGNILSAAAKSSS 430
Query: 335 LELP--VAEQPSPS-SAYNAESFEQSVGVNQPSAAGTKRKLDEYLD 463
P ++++ P Y ++SFE VG+++ G+ + L E+ D
Sbjct: 431 KHPPSFISQEDRPIFEKYQSDSFEVQVGIHELLGHGSGKLLTEFTD 476
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,505,061
Number of Sequences: 1657284
Number of extensions: 13035191
Number of successful extensions: 44034
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 41458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43956
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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