Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20a04
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 193 FETIFDKCQLCFSHNFIAQAIFNILCRNIR 104
           F+T  + C +   + F+  ++ NIL R+ +
Sbjct: 168 FKTFLNSCLMDVYYEFLLISLINILIRSFK 197


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 532 LIVVLCFYAFYMA 494
           LI++LC Y FY A
Sbjct: 232 LIILLCIYYFYYA 244


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 126 LKIACAIKLWLKQSWHLSKIV 188
           L +  A+K W K+ +  SKIV
Sbjct: 394 LSVDYAVKFWTKKGFPKSKIV 414


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 585 TPYALVISICSA 550
           TPY L+I +C+A
Sbjct: 285 TPYYLLIEVCNA 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,078
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)