Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1p24
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD0853...   200   2e-51
AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB...   200   2e-51
AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA...   200   2e-51

>AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD08534
           protein.
          Length = 188

 Score =  200 bits (487), Expect = 2e-51
 Identities = 89/118 (75%), Positives = 104/118 (88%)
 Frame = +1

Query: 379 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 558
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 559 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVL 732
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQL 138


>AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB,
           isoform B protein.
          Length = 174

 Score =  200 bits (487), Expect = 2e-51
 Identities = 89/118 (75%), Positives = 104/118 (88%)
 Frame = +1

Query: 379 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 558
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 7   VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 66

Query: 559 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVL 732
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L
Sbjct: 67  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQL 124


>AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA,
           isoform A protein.
          Length = 188

 Score =  200 bits (487), Expect = 2e-51
 Identities = 89/118 (75%), Positives = 104/118 (88%)
 Frame = +1

Query: 379 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 558
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 559 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVL 732
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQL 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,629,287
Number of Sequences: 53049
Number of extensions: 510496
Number of successful extensions: 1070
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)