Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1p24
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 159 2e-39
U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 7.9
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 7.9
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 159 bits (386), Expect = 2e-39
Identities = 79/112 (70%), Positives = 89/112 (79%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPR
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKI 298
Score = 151 bits (366), Expect = 5e-37
Identities = 73/112 (65%), Positives = 86/112 (76%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPR
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPR 409
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I
Sbjct: 410 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQI 461
Score = 142 bits (345), Expect = 2e-34
Identities = 72/112 (64%), Positives = 83/112 (74%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPR
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPR 90
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I
Sbjct: 91 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQI 142
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 159 bits (386), Expect = 2e-39
Identities = 79/112 (70%), Positives = 89/112 (79%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPR
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKI 298
Score = 151 bits (366), Expect = 5e-37
Identities = 73/112 (65%), Positives = 86/112 (76%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPR
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPR 409
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I
Sbjct: 410 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQI 461
Score = 142 bits (345), Expect = 2e-34
Identities = 72/112 (64%), Positives = 83/112 (74%)
Frame = +1
Query: 382 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 561
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPR
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPR 90
Query: 562 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKI 717
SGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I
Sbjct: 91 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQI 142
>U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical
protein C05D11.7a protein.
Length = 621
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 499 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 642
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 499 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 642
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 430 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 609
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 610 DED 618
D D
Sbjct: 325 DND 327
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 23 PATNKNYSPLMLDVFPKRITATINFLRTKIEK*FAHLIVNKEYHIK 160
P+ N+NY P +++ F + LR K+E F I+ HI+
Sbjct: 396 PSVNENYHPELVNQFKSHLDEHEKALRRKLEAQFPDHIITLIPHIE 441
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 430 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 609
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 610 DED 618
D D
Sbjct: 325 DND 327
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 23 PATNKNYSPLMLDVFPKRITATINFLRTKIEK*FAHLIVNKEYHIK 160
P+ N+NY P +++ F + LR K+E F I+ HI+
Sbjct: 396 PSVNENYHPELVNQFKSHLDEHEKALRRKLEAQFPDHIITLIPHIE 441
>AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical
protein Y75B7AL.1 protein.
Length = 542
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 168 INYFI*YSLLTIRCANYFSIFVRRKLIVAVILLGKTSNING 46
INY + Y+ L FS+ + + VIL G N+NG
Sbjct: 20 INYSLCYTPLHDETYKTFSVILNGYITTGVILFGTIGNLNG 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,542
Number of Sequences: 27780
Number of extensions: 280780
Number of successful extensions: 529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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