Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1p03
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74042-9|CAA98526.1|  325|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024775-5|AAK68457.3|  259|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z74042-9|CAA98526.1|  325|Caenorhabditis elegans Hypothetical
           protein T11F9.10 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 572 DTVISATVATDARPRARLPHSKNIHMPKYCLL 667
           + +++A  A DA+P  R   S NI M KYC+L
Sbjct: 281 EKILAAQAANDAKPIGRNQLSTNICMYKYCVL 312


>AC024775-5|AAK68457.3|  259|Caenorhabditis elegans Hypothetical
           protein Y41D4A.7 protein.
          Length = 259

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 346 SKLSLPVSLTM*LKCCVTYLCVKTRLLVLPILPKKNLNKNP*FI 215
           S  S PVS  + +K   TY+ ++++++   + P KN+N  P F+
Sbjct: 20  SSSSFPVSRDL-VKFPETYVLMRSKIVDCEVEPSKNMNPKPGFL 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,638
Number of Sequences: 27780
Number of extensions: 271392
Number of successful extensions: 526
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)