Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1n16
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    27   0.14 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    27   0.14 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   5.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   5.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   5.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 37  FPLFSKDFNFIFIFVVVMCLQ*YNLFTKSTMNTLPEATIVDSSQL 171
           + LFSKDF F F  ++  C      F K   NTL   +  D SQL
Sbjct: 62  YALFSKDFRFAFKSIICKC------FCKRRTNTLRRGS--DGSQL 98


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 37  FPLFSKDFNFIFIFVVVMCLQ*YNLFTKSTMNTLPEATIVDSSQL 171
           + LFSKDF F F  ++  C      F K   NTL   +  D SQL
Sbjct: 510 YALFSKDFRFAFKSIICKC------FCKRRTNTLRRGS--DGSQL 546


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 627 EYFNNYPADIE 659
           +Y NNYP+DI+
Sbjct: 60  DYKNNYPSDID 70


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 108 FIYKKYNEYVTRGHYRGFKSINTSLFD 188
           F++   N+Y+ R +Y  F ++ T+ +D
Sbjct: 120 FVFDDLNDYINRLNYSAFVNL-TAYYD 145


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 627 EYFNNYPADIE 659
           +Y NNYP+DI+
Sbjct: 60  DYKNNYPSDID 70


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 627 EYFNNYPADIE 659
           +Y NNYP+DI+
Sbjct: 60  DYKNNYPSDID 70


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 272 KLFRLSEIGFCSTSPKV 222
           +LFR+  + F STSP++
Sbjct: 232 RLFRIPLVSFFSTSPEL 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,841
Number of Sequences: 438
Number of extensions: 4936
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)