Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1n07
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 28 1.8
AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended ani... 27 3.1
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 27 4.1
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 27 4.1
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 5.4
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 26 7.2
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 26 7.2
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 26 7.2
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 26 7.2
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 26 7.2
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 26 7.2
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 26 7.2
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 7.2
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 7.2
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 26 7.2
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 26 7.2
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 26 7.2
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 26 7.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 26 9.5
U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical p... 26 9.5
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 0.58
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 KHKRLTIYICNNFLIFTLKSARMIERTVTRWHLL--SDNVLLKIGEVAQRLNYYLQEYAN 191
K L IY N FL S ++ + H L D+V L +G A Y Q +
Sbjct: 412 KEYGLKIYGLNQFL----SSDSLLGSNLYTGHCLLNGDDVKLDLGVFAPNSRIYEQTLES 467
Query: 192 LEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLNS 335
+ ++ ++KY + D E+++ L + MS E LKL+S
Sbjct: 468 WNL-MKSQVKYSTVVDKEDVENTLGHLASEMSQYEIAFNDGSTLKLSS 514
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 0.58
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 KHKRLTIYICNNFLIFTLKSARMIERTVTRWHLL--SDNVLLKIGEVAQRLNYYLQEYAN 191
K L IY N FL S ++ + H L D+V L +G A Y Q +
Sbjct: 412 KEYGLKIYGLNQFL----SSDSLLGSNLYTGHCLLNGDDVKLDLGVFAPNSRIYEQTLES 467
Query: 192 LEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLNS 335
+ ++ ++KY + D E+++ L + MS E LKL+S
Sbjct: 468 WNL-MKSQVKYSTVVDKEDVENTLGHLASEMSQYEIAFNDGSTLKLSS 514
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 195 EMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLY 311
+++ E E K+ +IDT++T LRN E +D Y
Sbjct: 150 KLETETEKKWFAAMRVSDIDTMRTLLRNEPEIIEAKDQY 188
>AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended
animation (anoxia-induced)defective protein 1 protein.
Length = 390
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 327 ILMLTRTNHAVPPWTWNCAKKS*QCRFLRRH 235
+L+L RTN AVP N A+ + + R +RRH
Sbjct: 176 VLILARTNCAVPIQIVNDAEDALEMREMRRH 206
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 169 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 267
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 169 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 267
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 5.4
Identities = 20/93 (21%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +3
Query: 69 LKSARMIERTVTRWHLLSDNVLLKIGEVAQ-RLNYYLQEYANLEMQIEEEIKYMEID--D 239
L +++ + R+V + + LL++ + + ++ + +L+ EEIK +++D +
Sbjct: 791 LSASQEVSRSVVDAAVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQN 850
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLNSL 338
++ V L ++++ +RD+ ALA +L L
Sbjct: 851 FKQNAEVLESLNEKLNSSHKRDMVALASQLEEL 883
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
R03G5.3 protein.
Length = 1311
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 357 YIKYYLL-NCLILMLTRT-NHAVPPWTWNCAKKS*QCRFLRRHQFPYI*F 214
Y KY LL +C++ +++ N +V +KS +C F +++ F Y+ F
Sbjct: 1134 YEKYALLVSCMVFVVSNVWNLSVMETLVTHIRKSSRCHFFQQNNFAYVLF 1183
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 201 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 308
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 615 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 650
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 201 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 308
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 615 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 650
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 201 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 308
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 601 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 636
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 147 EVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 290
E ++ L L E I K++++++ EEIDT RNS ++
Sbjct: 237 ETSEALRVTLAEMLTDPTTISSSPKHIKLEEPEEIDTEDLGARNSQNS 284
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 147 EVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 290
E ++ L L E I K++++++ EEIDT RNS ++
Sbjct: 234 ETSEALRVTLAEMLTDPTTISSSPKHIKLEEPEEIDTEDLGARNSQNS 281
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1857 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1885
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1827 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1855
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1883 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1911
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1857 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1885
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1827 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1855
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDTVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1883 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1911
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 156 QRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLY 311
+R+ ++E E ++ E+++ + + E+ + K ++ MST EQ+DLY
Sbjct: 474 ERMKNAVREANRREFEMLEKLENSKKSEEEKEELAK---KDQMSTEEQKDLY 522
>U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical
protein F26A1.13 protein.
Length = 451
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 165 NYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 308
N++L++ + Q+EE I+ + I ++I+ + NSM+ A+ R L
Sbjct: 293 NHFLKKRSGRHSQLEE-IQLLAIRTRQKIEADRITSSNSMAAAKYRQL 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,701,359
Number of Sequences: 27780
Number of extensions: 144248
Number of successful extensions: 524
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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