Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1n07
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   6.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   8.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   8.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   8.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 250 STLSRLFCAIPCPRRNSVIC 309
           ST++   C   CPRR+  +C
Sbjct: 99  STIAVCVCMRKCPRRHRPVC 118


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 157 WATSPIFNNTLSDNKCQRVTVRSIILALFNVNIKK 53
           W+T PI + T SDN  + +T  +++    N+ I K
Sbjct: 93  WSTLPIEDLTKSDN--EDITYPTVLEVQLNLPILK 125


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 157 WATSPIFNNTLSDNKCQRVTVRSIILALFNVNIKK 53
           W+T PI + T SDN  + +T  +++    N+ I K
Sbjct: 131 WSTLPIEDLTKSDN--EDITYPTVLEVQLNLPILK 163


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 29  FNDIYMQQLFNIHIKKCQDDRTHSNSLAFIVG*CIIKNWRGRPTTK 166
           FND  MQ+ +NI +    D +   N++ + +   +  N+ G   TK
Sbjct: 169 FNDEVMQKAYNIAMGDTADMKKTYNNIDYYL---LAANYTGWYLTK 211


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 29  FNDIYMQQLFNIHIKKCQDDRTHSNSLAFIVG*CIIKNWRGRPTTK 166
           FND  MQ+ +NI +    D +   N++ + +   +  N+ G   TK
Sbjct: 169 FNDEVMQKAYNIAMGDTADMKKTYNNIDYYL---LAANYTGWYLTK 211


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 201 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLY 311
           ++ E+ K  EID+G+E  T  +  R    T +++  Y
Sbjct: 209 KVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKVNY 245


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 103 LVGIYCRIMYY 135
           ++GIYCR+  Y
Sbjct: 208 MLGIYCRLYCY 218


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 135 IIHYPTINANELLCVLSSWHFLM 67
           ++H  T + +E   VL SW  LM
Sbjct: 253 LVHLYTRDQSETYDVLRSWRNLM 275


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 189 LRILANNNLVVGRPRQFLIIHYPTINANELLC 94
           ++IL N   ++  P + +  HYPT   N L+C
Sbjct: 778 VQILINGVWMIIDPAKAMH-HYPTREDNLLVC 808


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,342
Number of Sequences: 438
Number of extensions: 1839
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)