Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1n04
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104481-1|AAI04482.1| 113|Homo sapiens DPM3 protein protein. 70 7e-12
BC065233-1|AAH65233.1| 106|Homo sapiens DPM3 protein protein. 70 7e-12
BC104203-1|AAI04204.1| 122|Homo sapiens dolichyl-phosphate mann... 68 4e-11
BC104202-1|AAI04203.1| 122|Homo sapiens dolichyl-phosphate mann... 68 4e-11
BC032223-1|AAH32223.2| 94|Homo sapiens DPM3 protein protein. 68 4e-11
AL691442-11|CAI15326.1| 122|Homo sapiens dolichyl-phosphate man... 68 4e-11
AF312922-1|AAK28487.1| 122|Homo sapiens prostin 1 long isoform ... 68 4e-11
AL691442-10|CAI15325.1| 92|Homo sapiens dolichyl-phosphate man... 67 6e-11
AF312923-1|AAK28486.1| 92|Homo sapiens prostin 1 short isoform... 67 6e-11
AB028128-1|BAA96291.1| 92|Homo sapiens dolichol-phosphate-mann... 66 1e-10
>BC104481-1|AAI04482.1| 113|Homo sapiens DPM3 protein protein.
Length = 113
Score = 70.1 bits (164), Expect = 7e-12
Identities = 35/99 (35%), Positives = 56/99 (56%)
Frame = +3
Query: 333 ENYATIRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYS 512
E + + MTKL +W+ + + W +L G + L + P Y L+ G Y+
Sbjct: 15 ETWGRVTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYA 74
Query: 513 VSVILFRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+ + +RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 75 LGTVGYRVATFHDCEDAARELQSQIQEARADLARRGLRF 113
>BC065233-1|AAH65233.1| 106|Homo sapiens DPM3 protein protein.
Length = 106
Score = 70.1 bits (164), Expect = 7e-12
Identities = 35/99 (35%), Positives = 56/99 (56%)
Frame = +3
Query: 333 ENYATIRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYS 512
E + + MTKL +W+ + + W +L G + L + P Y L+ G Y+
Sbjct: 8 ETWGRVTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYA 67
Query: 513 VSVILFRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+ + +RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 68 LGTVGYRVATFHDCEDAARELQSQIQEARADLARRGLRF 106
>BC104203-1|AAI04204.1| 122|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 3 protein.
Length = 122
Score = 67.7 bits (158), Expect = 4e-11
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +3
Query: 348 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 527
+ MTKL +W+ + + W +L G + L + P Y L+ G Y++ +
Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88
Query: 528 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122
>BC104202-1|AAI04203.1| 122|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 3 protein.
Length = 122
Score = 67.7 bits (158), Expect = 4e-11
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +3
Query: 348 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 527
+ MTKL +W+ + + W +L G + L + P Y L+ G Y++ +
Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88
Query: 528 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122
>BC032223-1|AAH32223.2| 94|Homo sapiens DPM3 protein protein.
Length = 94
Score = 67.7 bits (158), Expect = 4e-11
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +3
Query: 348 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 527
+ MTKL +W+ + + W +L G + L + P Y L+ G Y++ +
Sbjct: 1 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 60
Query: 528 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 61 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 94
>AL691442-11|CAI15326.1| 122|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 3 protein.
Length = 122
Score = 67.7 bits (158), Expect = 4e-11
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +3
Query: 348 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 527
+ MTKL +W+ + + W +L G + L + P Y L+ G Y++ +
Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88
Query: 528 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122
>AF312922-1|AAK28487.1| 122|Homo sapiens prostin 1 long isoform
protein.
Length = 122
Score = 67.7 bits (158), Expect = 4e-11
Identities = 34/94 (36%), Positives = 54/94 (57%)
Frame = +3
Query: 348 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 527
+ MTKL +W+ + + W +L G + L + P Y L+ G Y++ +
Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88
Query: 528 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
+RV TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122
>AL691442-10|CAI15325.1| 92|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 3 protein.
Length = 92
Score = 66.9 bits (156), Expect = 6e-11
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +3
Query: 354 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 533
MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R
Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60
Query: 534 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
V TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGLRF 92
>AF312923-1|AAK28486.1| 92|Homo sapiens prostin 1 short isoform
protein.
Length = 92
Score = 66.9 bits (156), Expect = 6e-11
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +3
Query: 354 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 533
MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R
Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60
Query: 534 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
V TF++CE+AA+ELQ +I EA+ DL RGLR+
Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGLRF 92
>AB028128-1|BAA96291.1| 92|Homo sapiens dolichol-phosphate-mannose
synthase protein.
Length = 92
Score = 65.7 bits (153), Expect = 1e-10
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = +3
Query: 354 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 533
MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R
Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60
Query: 534 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 629
V TF++CE+AA+ELQ +I EA+ DL RG+R+
Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGVRF 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,585,679
Number of Sequences: 237096
Number of extensions: 1672750
Number of successful extensions: 6603
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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