Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m24
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            31   0.025
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            31   0.025
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   3.8  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   3.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 31.5 bits (68), Expect = 0.025
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 560  LTLNLTNFSASHNLPGLK-IFEILQHQHRYSNNL 462
            LT + TN S  H   G K IF    HQHRYS++L
Sbjct: 2326 LTTDCTNPSLCHGREGTKSIFSDFIHQHRYSHHL 2359



 Score = 28.7 bits (61), Expect = 0.18
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
 Frame = +2

Query: 212  SDPLPGSSAPRYMYESSESDTYMEP---ARHTAEHYTDQDKDYNAAYTADEYNSLVRT-- 376
            +D L     P Y Y +  S     P   A +T+E    Q + +   Y  D  N L+R   
Sbjct: 1873 NDKLQQELPPIYHYRAHTSTMENVPFFVANYTSEQMQLQQQ-WEVRYNYDNANRLIRKRT 1931

Query: 377  ----VLLRLIEKA--LATLTNRLHITTIDQLKKFRDYLNSDADAGEFQIFLNQEDCVML 535
                +   L +K   L    ++ H  T+D++  F  Y++ D  A E  + LN+ +C+ L
Sbjct: 1932 PDGGIWQYLYDKQGILRFSLHKEHNETLDRVIHFT-YVSDDKVAREALVHLNETECIEL 1989


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 31.5 bits (68), Expect = 0.025
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 560  LTLNLTNFSASHNLPGLK-IFEILQHQHRYSNNL 462
            LT + TN S  H   G K IF    HQHRYS++L
Sbjct: 2336 LTTDCTNPSLCHGREGTKSIFNDFIHQHRYSHHL 2369


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  VKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANA-LLNRRAQTSADDVVNRADAN 196
           +K DRLF    K +MD+        E +++  E    N    + + ++ A  V+N    N
Sbjct: 34  LKSDRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIKVINYVIEN 93

Query: 197 ISTAFSDPLPGSSAPRYMY 253
               + D L     P  +Y
Sbjct: 94  RKEQW-DALQKKYDPENLY 111


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  VKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANA-LLNRRAQTSADDVVNRADAN 196
           +K DRLF    K +MD+        E +++  E    N    + + ++ A  V+N    N
Sbjct: 34  LKSDRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIKVINYVIEN 93

Query: 197 ISTAFSDPLPGSSAPRYMY 253
               + D L     P  +Y
Sbjct: 94  RKEQW-DALQKKYDPENLY 111


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/55 (20%), Positives = 22/55 (40%)
 Frame = -1

Query: 434 LCATDSLEWPALFRLNAKEPS*PGNCTRRQCTPRCSPCPDRCNVRRYVGRVPCTC 270
           LC  + ++W  + + +  E     N    +C      C ++C+     G+ P  C
Sbjct: 435 LCFVEDIDWSEIKKSSDHEVMVQKNRNATECHEEGMECSEQCSKAGCWGKGPEQC 489


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 280  GTRPTYRRTLHRSGQGLQRGVHCRRVQFPGQDGSFAFNRKSAGHSNES 423
            G+R +  R+  RSG    RG    R +   + GS + +R  +G    S
Sbjct: 1140 GSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSRQAS 1187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,976
Number of Sequences: 2352
Number of extensions: 11563
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)