Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m24
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 31 0.74
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 0.74
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 0.74
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 0.74
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 0.74
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.98
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 31 0.98
AF016423-6|AAB65325.1| 258|Caenorhabditis elegans Hypothetical ... 30 1.7
U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 3.0
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 29 3.9
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 29 3.9
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 28 5.2
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 28 6.9
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 28 6.9
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 28 6.9
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 28 6.9
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 28 6.9
Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical pr... 27 9.1
AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear horm... 27 9.1
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 31.1 bits (67), Expect = 0.74
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 162 PQTMLLIVPTPIFPRHLAIRFQVPARRGTCTKVQNRTRTWN 284
PQ M I + ++ + I QVPARRG T TWN
Sbjct: 444 PQEMKRIKVSKLYKKRPLIVNQVPARRGNSQDETQETYTWN 484
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.1 bits (67), Expect = 0.74
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
Frame = +2
Query: 8 EECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANAL--LNRRAQTSADDVVN 181
EE ++ ++ ++K+ + + E ER R E + A+ L R Q D V
Sbjct: 848 EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
Query: 182 RADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYN 361
+ D I+ R + +S E ++ E TD++K+ + N
Sbjct: 908 KEDKEIALR-----------RDLEDSHEKSRDLDDKLRKME-LTDEEKEEDRKKEQKTLN 955
Query: 362 SLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDAD---AG--EFQIFLNQEDC 526
R L+ E+A+ T H TTIDQ + L D + AG E + +N +
Sbjct: 956 E-ERMKLMEQKEEAMLVATK--HATTIDQQTRRISVLEGDVEKLTAGIAERESSINALES 1012
Query: 527 VMLKNLSNLASKFFNVRCVADTLEVMLE 610
++ +S L + + + D L VML+
Sbjct: 1013 NTMELISKLETTEAELEKLKDELAVMLK 1040
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.1 bits (67), Expect = 0.74
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
Frame = +2
Query: 8 EECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANAL--LNRRAQTSADDVVN 181
EE ++ ++ ++K+ + + E ER R E + A+ L R Q D V
Sbjct: 848 EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
Query: 182 RADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYN 361
+ D I+ R + +S E ++ E TD++K+ + N
Sbjct: 908 KEDKEIALR-----------RDLEDSHEKSRDLDDKLRKME-LTDEEKEEDRKKEQKTLN 955
Query: 362 SLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDAD---AG--EFQIFLNQEDC 526
R L+ E+A+ T H TTIDQ + L D + AG E + +N +
Sbjct: 956 E-ERMKLMEQKEEAMLVATK--HATTIDQQTRRISVLEGDVEKLTAGIAERESSINALES 1012
Query: 527 VMLKNLSNLASKFFNVRCVADTLEVMLE 610
++ +S L + + + D L VML+
Sbjct: 1013 NTMELISKLETTEAELEKLKDELAVMLK 1040
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.1 bits (67), Expect = 0.74
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
Frame = +2
Query: 8 EECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANAL--LNRRAQTSADDVVN 181
EE ++ ++ ++K+ + + E ER R E + A+ L R Q D V
Sbjct: 608 EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 667
Query: 182 RADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYN 361
+ D I+ R + +S E ++ E TD++K+ + N
Sbjct: 668 KEDKEIALR-----------RDLEDSHEKSRDLDDKLRKME-LTDEEKEEDRKKEQKTLN 715
Query: 362 SLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDAD---AG--EFQIFLNQEDC 526
R L+ E+A+ T H TTIDQ + L D + AG E + +N +
Sbjct: 716 E-ERMKLMEQKEEAMLVATK--HATTIDQQTRRISVLEGDVEKLTAGIAERESSINALES 772
Query: 527 VMLKNLSNLASKFFNVRCVADTLEVMLE 610
++ +S L + + + D L VML+
Sbjct: 773 NTMELISKLETTEAELEKLKDELAVMLK 800
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.1 bits (67), Expect = 0.74
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
Frame = +2
Query: 8 EECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANAL--LNRRAQTSADDVVN 181
EE ++ ++ ++K+ + + E ER R E + A+ L R Q D V
Sbjct: 848 EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
Query: 182 RADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYN 361
+ D I+ R + +S E ++ E TD++K+ + N
Sbjct: 908 KEDKEIALR-----------RDLEDSHEKSRDLDDKLRKME-LTDEEKEEDRKKEQKTLN 955
Query: 362 SLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDAD---AG--EFQIFLNQEDC 526
R L+ E+A+ T H TTIDQ + L D + AG E + +N +
Sbjct: 956 E-ERMKLMEQKEEAMLVATK--HATTIDQQTRRISVLEGDVEKLTAGIAERESSINALES 1012
Query: 527 VMLKNLSNLASKFFNVRCVADTLEVMLE 610
++ +S L + + + D L VML+
Sbjct: 1013 NTMELISKLETTEAELEKLKDELAVMLK 1040
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 ECYVKIDRLFKESIKKIMDDT-EAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRA 187
E K+D +FKE ++ D+ E+ +K Q+ E+ A++T AN + R D+ ++R
Sbjct: 899 EIQSKLDGIFKELVQCHRDEAKESLQKRQKLEKDIAKET-ANISNSGRNIAKCDENISRH 957
Query: 188 DANI 199
D +I
Sbjct: 958 DKDI 961
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 506 FLNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEALRNNIELVQP 643
F++ E L+++ N+ + V C + + V+L+A R N+E +QP
Sbjct: 626 FIDAESGKTLEDVRNVEAGCELVACDSQSANVILQAARGNLETIQP 671
>AF016423-6|AAB65325.1| 258|Caenorhabditis elegans Hypothetical
protein F40A3.6 protein.
Length = 258
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/118 (25%), Positives = 47/118 (39%)
Frame = +2
Query: 71 TEAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFSDPLPGSSAPRYM 250
+E F EAER R ++ L + + +D N+ ++ S P P
Sbjct: 125 SEYFAASYEAERERRKKDLERELASYDKE-DYEDFTGEPKKNLYSSISSYRP----PLSS 179
Query: 251 YESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRLIEKALATLTNR 424
Y+S E + Y + R T Y D D + Y + VR+ R+I LT+R
Sbjct: 180 YKSREDEEYEKNNRKTLIDYKDFDSSPLSPYLYQSH-PYVRSQDSRIIGSNFVQLTSR 236
>U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical
protein C56G2.7 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +2
Query: 212 SDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRL 391
SD LP SS PR SSE+D EP+ + AE + N +N+L R+ +
Sbjct: 187 SDTLPISSVPRGEDASSEAD--CEPSTNAAEEGSSNPLSLNNPAIQQIFNNLGRSQKKEV 244
Query: 392 IEKALATLTN 421
L+N
Sbjct: 245 AVSLATALSN 254
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 44 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 214
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical
protein F55H12.5 protein.
Length = 287
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 347 ADEYNSLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDADAGEFQ 502
AD + R LL + +T + R TT+ KKF D++NS ++ F+
Sbjct: 2 ADTVQTNGRASLLAAVNNRASTRSTRKKKTTMLSPKKFCDFINSKTNSKSFE 53
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 44 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 214
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 44 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 214
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 28.7 bits (61), Expect = 3.9
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Frame = +2
Query: 23 KIDRLFKESIKKIMDDTE-AFEKEQEAERLRAEQTAA---NALLNRRAQTSADDVV---- 178
K+DR+F E ++K D E A ++ + E+ A QTA N +A+ ++
Sbjct: 902 KMDRMFMELVQKNKDSIEQAKDRMGQLEQDIARQTAIIENNPSHLEQAEKKLSELEHMCL 961
Query: 179 ---NRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTA 349
+ ADA + + G ++S + + AR+T ++ D T
Sbjct: 962 EKRSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEAVAARREADAAYQTTV 1021
Query: 350 DEYNSLVRTV--LLRLIE 397
D YN + +T L+R+I+
Sbjct: 1022 DNYNMVKQTYDELMRIID 1039
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 28.7 bits (61), Expect = 3.9
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Frame = +2
Query: 23 KIDRLFKESIKKIMDDTE-AFEKEQEAERLRAEQTAA---NALLNRRAQTSADDVV---- 178
K+DR+F E ++K D E A ++ + E+ A QTA N +A+ ++
Sbjct: 902 KMDRMFMELVQKNKDSIEQAKDRMGQLEQDIARQTAIIENNPSHLEQAEKKLSELEHMCL 961
Query: 179 ---NRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTA 349
+ ADA + + G ++S + + AR+T ++ D T
Sbjct: 962 EKRSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEAVAARREADAAYQTTV 1021
Query: 350 DEYNSLVRTV--LLRLIE 397
D YN + +T L+R+I+
Sbjct: 1022 DNYNMVKQTYDELMRIID 1039
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 DRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADD-VVNRADANIST 205
DR F++S ++ E +EQ+ ER RAEQ R Q A + R + S+
Sbjct: 368 DRYFEKSANSRREE-EQNRREQQRERERAEQERRREREKEREQEKAKEREKKRKELEESS 426
Query: 206 AFSDPLPG 229
+ + PG
Sbjct: 427 GYDECYPG 434
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 10 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 55
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Frame = +2
Query: 5 AEECYVKIDRLFKESIKKIMDDTEAFEKEQEAER--LRAEQTAANALL--NRRAQTSADD 172
AEE K++ E +DD A EKE+ AE+ E T A + ++T +
Sbjct: 549 AEETKPKVESFKSEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTEASETPKPE 608
Query: 173 VVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAE 304
+N+ + P + E E T A T+E
Sbjct: 609 AKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAEATSE 652
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Frame = +2
Query: 5 AEECYVKIDRLFKESIKKIMDDTEAFEKEQEAER--LRAEQTAANALL--NRRAQTSADD 172
AEE K++ E +DD A EKE+ AE+ E T A + ++T +
Sbjct: 549 AEETKPKVESFKSEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTEASETPKPE 608
Query: 173 VVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAE 304
+N+ + P + E E T A T+E
Sbjct: 609 AKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAEATSE 652
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 10 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 55
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 116 EQTAANALLNRRAQTSADDV-VNRADANISTAFSDP--LPGSSAPRYMYESSESDTYMEP 286
+QTA + + R A + + N T+F+ P LPG++AP+ + S ++ + P
Sbjct: 122 QQTAKSPVATRLAAFKSGTLGAGSLSGNTPTSFATPSALPGTNAPQSSFLSPANNLNVAP 181
Query: 287 ARHTAEHYT 313
A + + T
Sbjct: 182 AAYRPPYST 190
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 116 EQTAANALLNRRAQTSADDV-VNRADANISTAFSDP--LPGSSAPRYMYESSESDTYMEP 286
+QTA + + R A + + N T+F+ P LPG++AP+ + S ++ + P
Sbjct: 95 QQTAKSPVATRLAAFKSGTLGAGSLSGNTPTSFATPSALPGTNAPQSSFLSPANNLNVAP 154
Query: 287 ARHTAEHYT 313
A + + T
Sbjct: 155 AAYRPPYST 163
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 215 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 343
+P+ S P Y+Y+ + E D Y ++ +H+ Q DY+ +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396
>Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical
protein R03D7.5 protein.
Length = 363
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 193 GVGTINNIVCGRLRSPVQKSV 131
G G +N+ CG++ SP++K V
Sbjct: 27 GSGRFSNVYCGQMISPIEKEV 47
>AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 274 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 401 LFRLNAKEP--S*PGNCTRRQCTPRCSPCPDRCNVRRYVGRVPCTCPILNFR 252
+ R++ P S PG T+ T C+ C DR N +RY G C I+ FR
Sbjct: 12 IHRISTSSPDTSPPGTSTQDD-TDGCAVCGDRVNGKRY-GAPACLGCIVFFR 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,426,399
Number of Sequences: 27780
Number of extensions: 263982
Number of successful extensions: 1144
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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