Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m19
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41273-7|AAP68952.1| 237|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41273-6|AAA82457.2| 404|Caenorhabditis elegans Hypothetical pr... 30 1.7
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 2.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 2.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 28 6.9
AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 28 6.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 27 9.1
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 27 9.1
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 27 9.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 27 9.1
>U41273-7|AAP68952.1| 237|Caenorhabditis elegans Hypothetical
protein C26B9.1b protein.
Length = 237
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 323 WRGFWIKSMRICCLRTKKRSWPGCAMASKWAIL 421
W FWI ++ I L K WP WA+L
Sbjct: 44 WMTFWILTLTITLLFQSKGGWPVMIWCLVWAVL 76
>U41273-6|AAA82457.2| 404|Caenorhabditis elegans Hypothetical
protein C26B9.1a protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 323 WRGFWIKSMRICCLRTKKRSWPGCAMASKWAIL 421
W FWI ++ I L K WP WA+L
Sbjct: 211 WMTFWILTLTITLLFQSKGGWPVMIWCLVWAVL 243
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 636 PTEILLIKYYTCTNRALLLQFPRLTYTWRRDSWYPR*KWAWPPHPRV 496
PT+ L + + T T A Q P T T R+ WY + + AWP + R+
Sbjct: 143 PTQRLPLTWSTVTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTYNRI 188
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 636 PTEILLIKYYTCTNRALLLQFPRLTYTWRRDSWYPR*KWAWPPHPRV 496
PT+ L + + T T A Q P T T R+ WY + + AWP + R+
Sbjct: 139 PTQRLPLTWSTVTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTYNRI 184
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 636 PTEILLIKYYTCTNRALLLQFPRLTYTWRRDSWYPR*KWAWPPHPRV 496
PT+ L + + T T A Q P T T R+ WY + + AWP + R+
Sbjct: 82 PTQRLPLTWSTVTPTAAPSQ-PIPTATSRKAPWYIKDRTAWPTYNRI 127
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 84 KWSGCHETTSGLGSGERTWSCSRWWSEGRQGR*GWP*ATLCPI 212
+WS C T G G R SC EGR+ G CP+
Sbjct: 515 EWSMCSRTCGGCGIRSRVRSCRSKKCEGRRQEFGTCNLKACPV 557
>AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = -1
Query: 434 ASGILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNEGRCGIPDGPGEV 255
A+G L P P + W SKF C ++ S N + E C + +
Sbjct: 392 ANGQLTCPFSTPHEQ--TGILWQF-SKFECPINTSKIAFICENFGLAESICAVDNIRIHT 448
Query: 254 STSTFSSPRCEKGK 213
ST F C+K K
Sbjct: 449 STDVFFLEACQKDK 462
>AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = -1
Query: 434 ASGILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNEGRCGIPDGPGEV 255
A+G L P P + W SKF C ++ S N + E C + +
Sbjct: 500 ANGQLTCPFSTPHEQ--TGILWQF-SKFECPINTSKIAFICENFGLAESICAVDNIRIHT 556
Query: 254 STSTFSSPRCEKGK 213
ST F C+K K
Sbjct: 557 STDVFFLEACQKDK 570
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 555 WRRDSWYPR*KWAWPPHP 502
WRR W+ R W PP P
Sbjct: 66 WRRPPWHRRPPWGLPPPP 83
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 428 GILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNE 291
G LKL T LP++ LA SF D + F+ K L T+ VNE
Sbjct: 432 GYLKLYTTLPTKKLA-SFMDVDDEHYDSFIGK----LLTYKMIVNE 472
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 428 GILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNE 291
G LKL T LP++ LA SF D + F+ K L T+ VNE
Sbjct: 430 GYLKLYTTLPTKKLA-SFMDVDDEHYDSFIGK----LLTYKMIVNE 470
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -2
Query: 385 PAPFFGPQTANSHAFYPKASPPWRLSIALSMKAVVEFQMGLEKFPLPRFH 236
P+ F P + S A P PP S MK+ + PL RFH
Sbjct: 291 PSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPLNRFH 340
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -2
Query: 385 PAPFFGPQTANSHAFYPKASPPWRLSIALSMKAVVEFQMGLEKFPLPRFH 236
P+ F P + S A P PP S MK+ + PL RFH
Sbjct: 293 PSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPLNRFH 342
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 289 PSLTEQLKVAKVARLLDKKHENLLSADQKKELARLRDGKQVGNFKMPDAP 438
P +TE+ K + +KK E +++A++KKE A + + K+ ++P+ P
Sbjct: 119 PVVTEEKKSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKK----EVPETP 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,863,098
Number of Sequences: 27780
Number of extensions: 295776
Number of successful extensions: 965
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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