Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m18
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 34 0.58
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 34 0.58
D10667-1|BAA36971.1| 1052|Homo sapiens smooth muscle myosin heav... 32 1.8
BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase D... 32 1.8
BC104906-1|AAI04907.1| 1938|Homo sapiens myosin, heavy chain 11,... 32 1.8
BC101677-1|AAI01678.1| 1938|Homo sapiens myosin, heavy chain 11,... 32 1.8
BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase D... 32 1.8
BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase D... 32 1.8
AY520817-1|AAS98911.1| 1945|Homo sapiens smooth muscle myosin he... 32 1.8
AY520816-1|AAS98910.1| 1979|Homo sapiens smooth muscle myosin he... 32 1.8
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 32 1.8
AF001548-1|AAC31665.1| 1857|Homo sapiens Myosin heavy chain (MHY... 32 1.8
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 32 1.8
AB020673-1|BAA74889.2| 1984|Homo sapiens KIAA0866 protein protein. 32 1.8
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 32 2.3
BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated prot... 32 2.3
BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated prot... 32 2.3
AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated prot... 32 2.3
DQ088985-1|AAZ85980.1| 135|Homo sapiens CDH2 isoform 1 protein. 31 5.4
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 30 7.1
BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein. 30 7.1
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 30 7.1
AL591543-1|CAI17285.1| 992|Homo sapiens ankyrin repeat domain 1... 30 7.1
AL110271-1|CAB53709.1| 314|Homo sapiens hypothetical protein pr... 30 7.1
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 30 7.1
AB095935-1|BAC23111.1| 996|Homo sapiens KIAA2015 protein protein. 30 7.1
BC057227-1|AAH57227.1| 318|Homo sapiens Unknown (protein for IM... 30 9.4
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 33.9 bits (74), Expect = 0.58
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 372 MKSKLPYAIELQEWLLEEVIPQVLCT-GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQ 548
M+ KL A+ ++ LEE I ++ T K D ++Q +E VT+L A FT+ ++LQ
Sbjct: 2141 MQEKLD-ALRREKVHLEETIGEIQVTLNKKDKEVQQLQENLDSTVTQL-AAFTKSMSSLQ 2198
Query: 549 AVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQE 701
+ +E K + I K+++I K+ + + L +M +E
Sbjct: 2199 DDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMSIHMEE 2249
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 33.9 bits (74), Expect = 0.58
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 372 MKSKLPYAIELQEWLLEEVIPQVLCT-GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQ 548
M+ KL A+ ++ LEE I ++ T K D ++Q +E VT+L A FT+ ++LQ
Sbjct: 2107 MQEKLD-ALRREKVHLEETIGEIQVTLNKKDKEVQQLQENLDSTVTQL-AAFTKSMSSLQ 2164
Query: 549 AVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQE 701
+ +E K + I K+++I K+ + + L +M +E
Sbjct: 2165 DDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMSIHMEE 2215
>D10667-1|BAA36971.1| 1052|Homo sapiens smooth muscle myosin heavy
chain protein.
Length = 1052
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 147 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 206
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 207 QAALARLDDEIAQKNNALKKI 227
>BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG-KYDPAIKQQEEKNKQLVTKLIATFTE 530
G IQ ++K K ++ W EE + Q G K K++E++ KQ + K+ E
Sbjct: 303 GEIQYLIKWK-GWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE 361
Query: 531 HTNALQAVVAQKTEELFKKQEFIERIIAIK 620
+ N Q + + EL K+ + +ER+IA+K
Sbjct: 362 YFNCQQELAS----ELNKQYQIVERVIAVK 387
>BC104906-1|AAI04907.1| 1938|Homo sapiens myosin, heavy chain 11,
smooth muscle protein.
Length = 1938
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 1033 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 1092
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 1093 QAALARLDDEIAQKNNALKKI 1113
>BC101677-1|AAI01678.1| 1938|Homo sapiens myosin, heavy chain 11,
smooth muscle protein.
Length = 1938
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 1033 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 1092
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 1093 QAALARLDDEIAQKNNALKKI 1113
>BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG-KYDPAIKQQEEKNKQLVTKLIATFTE 530
G IQ ++K K ++ W EE + Q G K K++E++ KQ + K+ E
Sbjct: 303 GEIQYLIKWK-GWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE 361
Query: 531 HTNALQAVVAQKTEELFKKQEFIERIIAIK 620
+ N Q + + EL K+ + +ER+IA+K
Sbjct: 362 YFNCQQELAS----ELNKQYQIVERVIAVK 387
>BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG-KYDPAIKQQEEKNKQLVTKLIATFTE 530
G IQ ++K K ++ W EE + Q G K K++E++ KQ + K+ E
Sbjct: 303 GEIQYLIKWK-GWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE 361
Query: 531 HTNALQAVVAQKTEELFKKQEFIERIIAIK 620
+ N Q + + EL K+ + +ER+IA+K
Sbjct: 362 YFNCQQELAS----ELNKQYQIVERVIAVK 387
>AY520817-1|AAS98911.1| 1945|Homo sapiens smooth muscle myosin heavy
chain isoform SM2 protein.
Length = 1945
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 1040 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 1099
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 1100 QAALARLDDEIAQKNNALKKI 1120
>AY520816-1|AAS98910.1| 1979|Homo sapiens smooth muscle myosin heavy
chain isoform SM1 protein.
Length = 1979
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 1040 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 1099
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 1100 QAALARLDDEIAQKNNALKKI 1120
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG-KYDPAIKQQEEKNKQLVTKLIATFTE 530
G IQ ++K K ++ W EE + Q G K K++E++ KQ + K+ E
Sbjct: 303 GEIQYLIKWK-GWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE 361
Query: 531 HTNALQAVVAQKTEELFKKQEFIERIIAIK 620
+ N Q + + EL K+ + +ER+IA+K
Sbjct: 362 YFNCQQELAS----ELNKQYQIVERVIAVK 387
>AF001548-1|AAC31665.1| 1857|Homo sapiens Myosin heavy chain (MHY11)
(5'partial) protein.
Length = 1857
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 918 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 977
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 978 QAALARLDDEIAQKNNALKKI 998
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 655 VTCKSL--ASICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVTNCLFFS 482
V CK++ IC + S + C S C TT+C C + ++SL+ + + S
Sbjct: 192 VCCKTVYCKPICCVPVCSRASYSRCQQPSCQPACCTTSC----CRPSSSVSLLCHPVCRS 247
Query: 481 SCCLIAGSYLPVHST*GITSSKSHSC 404
+CC +PV S TSS SC
Sbjct: 248 TCC------VPVSSCCAPTSSCQSSC 267
>AB020673-1|BAA74889.2| 1984|Homo sapiens KIAA0866 protein protein.
Length = 1984
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +3
Query: 420 EEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFI 599
E +I ++ K + +Q+ EK K+ + + F E LQA +A+ +L KK+E +
Sbjct: 1045 ESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEEL 1104
Query: 600 ERIIAIKDKQIEAKDLQVTRV 662
+ +A D +I K+ + ++
Sbjct: 1105 QAALARLDDEIAQKNNALKKI 1125
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 655 VTCKSL--ASICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVTNCLFFS 482
V CK++ IC + S + C S C TT+C C + ++SL+ + + S
Sbjct: 192 VCCKTVYCKPICCVPVCSRASSSRCQQPSCQPACCTTSC----CRPSSSVSLLCHPVCRS 247
Query: 481 SCCLIAGSYLPVHST*GITSSKSHSC 404
+CC +PV S TSS SC
Sbjct: 248 TCC------VPVSSCCAPTSSCQSSC 267
>BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 31.9 bits (69), Expect = 2.3
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = -1
Query: 673 RSVITRVTCKSLA--SICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVT 500
+S V CK + IC + S + C S C TT+C SV++ +
Sbjct: 170 QSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPIC 229
Query: 499 N---CLFFSSCCLIAGSY 455
C+ SSCC A SY
Sbjct: 230 RPACCVPISSCCAPASSY 247
>BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 31.9 bits (69), Expect = 2.3
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = -1
Query: 673 RSVITRVTCKSLA--SICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVT 500
+S V CK + IC + S + C S C TT+C SV++ +
Sbjct: 170 QSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPIC 229
Query: 499 N---CLFFSSCCLIAGSY 455
C+ SSCC A SY
Sbjct: 230 RPACCVPISSCCAPASSY 247
>AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated protein
protein.
Length = 271
Score = 31.9 bits (69), Expect = 2.3
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = -1
Query: 673 RSVITRVTCKSLA--SICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVT 500
+S V CK + IC + S + C S C TT+C SV++ +
Sbjct: 170 QSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPIC 229
Query: 499 N---CLFFSSCCLIAGSY 455
C+ SSCC A SY
Sbjct: 230 RPACCVPISSCCAPASSY 247
>DQ088985-1|AAZ85980.1| 135|Homo sapiens CDH2 isoform 1 protein.
Length = 135
Score = 30.7 bits (66), Expect = 5.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 411 WLLEEVIPQVLCTG-KYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKK 587
W EE + Q G K K++E++ KQ + K+ E+ N Q + + EL K+
Sbjct: 13 WESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQQELAS----ELNKQ 68
Query: 588 QEFIERIIAIK 620
+ +ER+IA+K
Sbjct: 69 YQIVERVIAVK 79
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 255 RCTYICIFYPRVCLQRLYNFHILNCWRCP 169
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 255 RCTYICIFYPRVCLQRLYNFHILNCWRCP 169
RC FYPR CL +L H+L+ CP
Sbjct: 132 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 160
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 255 RCTYICIFYPRVCLQRLYNFHILNCWRCP 169
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>AL591543-1|CAI17285.1| 992|Homo sapiens ankyrin repeat domain 18A
protein.
Length = 992
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 369 IMKSKLPYAIELQEWLLEE-VIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNAL 545
++K +L YAI+ E+ I ++ + + ++ N++++TK +A +++ N L
Sbjct: 336 MLKEEL-YAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDL 394
Query: 546 QAVVAQKTEELFKKQEFIERIIA 614
+A A+ EL K++ ER+ A
Sbjct: 395 KAENARLNSELEKEKHNKERLEA 417
>AL110271-1|CAB53709.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 255 RCTYICIFYPRVCLQRLYNFHILNCWRCP 169
RC FYPR CL +L H+L+ CP
Sbjct: 38 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 66
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 255 RCTYICIFYPRVCLQRLYNFHILNCWRCP 169
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>AB095935-1|BAC23111.1| 996|Homo sapiens KIAA2015 protein protein.
Length = 996
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 369 IMKSKLPYAIELQEWLLEE-VIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNAL 545
++K +L YAI+ E+ I ++ + + ++ N++++TK +A +++ N L
Sbjct: 340 MLKEEL-YAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDL 398
Query: 546 QAVVAQKTEELFKKQEFIERIIA 614
+A A+ EL K++ ER+ A
Sbjct: 399 KAENARLNSELEKEKHNKERLEA 421
>BC057227-1|AAH57227.1| 318|Homo sapiens Unknown (protein for
IMAGE:4702419) protein.
Length = 318
Score = 29.9 bits (64), Expect = 9.4
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +3
Query: 372 MKSKLPYAIELQEWLLEEVIPQVLCT-GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQ 548
M+ KL A+ ++ LEE I ++ T K D ++Q +E VT+L A FT+ ++LQ
Sbjct: 226 MQEKLD-ALRREKVHLEETIGEIQVTLNKKDKEVQQLQENLDSTVTQL-AAFTKSMSSLQ 283
Query: 549 AVVAQKTEELFK-KQEFIERIIAIKDKQIEAK 641
+ +E K +++F + I + K K+ + K
Sbjct: 284 DDRDRVIDEAKKWERKFSDAIQSKKKKKKKKK 315
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,048,033
Number of Sequences: 237096
Number of extensions: 1949769
Number of successful extensions: 5872
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5872
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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