Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m16
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.2
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 5.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 6.7
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 8.9
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 8.9
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 8.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.9
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 8.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 508 KSRLQHAYRHVAVVVFVDQLGQTVFFVSFNRLFI 407
+ R + RH+ V ++D++ + VF SF L I
Sbjct: 452 RKRGEKIARHINSVSYIDKVARIVFPASFGLLNI 485
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 174 LNIMRTGFVNCVFIILLMYTNSLVCSST*QSRITVWDTS 58
LN M + V C + LLM TN + + T DT+
Sbjct: 691 LNTMESHEVRCTAVFLLMKTNPPLSMLQRMAEFTKLDTN 729
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 177 MLNIMRTGFVNCVFIILLMYTNSLVC 100
+L+++ GF+ + I L + N LVC
Sbjct: 22 LLSVLLVGFLFLILIFLSVAGNILVC 47
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/27 (25%), Positives = 18/27 (66%)
Frame = +2
Query: 212 NDLRDRIKSKVDEQFDQLEREYSDKID 292
ND R R+++ ++ ++ +REY +++
Sbjct: 404 NDARRRVEAALEAVEEERQREYGIRVE 430
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 702 LNDDGNINFCTNSSNCLPSNSTLS 631
++D G N C+NS + S S++S
Sbjct: 12 VSDSGYSNTCSNSQSQRSSGSSIS 35
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 702 LNDDGNINFCTNSSNCLPSNSTLS 631
++D G N C+NS + S S++S
Sbjct: 12 VSDSGYSNTCSNSQSQRSSGSSIS 35
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 620 LAYVDSVEFDGKQFEE 667
L YVD+ +F Q+EE
Sbjct: 278 LYYVDTEQFSNPQYEE 293
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 181 GSYTKRYAQEQRFARQN 231
G Y KRY +FA+ N
Sbjct: 109 GEYKKRYEHGLQFAKNN 125
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 596 TGLYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFN 703
+G Y Y +D ++GK F ++ +PSS N
Sbjct: 57 SGEYNYKNNVPIDVDRWNGKTFVTILRNDGVPSSLN 92
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 158 RVLSIACS*SC*CTPTLWFVRPH 90
RV+ CS +C L VRPH
Sbjct: 236 RVIPQVCSGNCKLNDILLTVRPH 258
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 181 GSYTKRYAQEQRFARQN 231
G Y KRY +FA+ N
Sbjct: 109 GEYKKRYEHGLQFAKNN 125
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 158 RVLSIACS*SC*CTPTLWFVRPH 90
RV+ CS +C L VRPH
Sbjct: 236 RVIPQVCSGNCKLNDILLTVRPH 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,035
Number of Sequences: 438
Number of extensions: 4128
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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