Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m14
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0781 + 11141469-11141486,11141855-11141978,11142024-111423... 219 2e-57
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 71 1e-12
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 33 0.17
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 33 0.30
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 33 0.30
06_02_0083 - 11539955-11540257,11540594-11540742,11540938-115410... 31 0.70
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 31 0.70
09_03_0029 + 11724581-11724583,11726413-11726610,11726874-117270... 31 0.92
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 31 0.92
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905... 31 1.2
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 30 1.6
11_06_0513 + 24466131-24469487 30 2.1
01_03_0282 - 14580875-14580891,14582126-14585855 30 2.1
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 29 2.8
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 29 2.8
03_04_0172 + 18017164-18017313,18017389-18017499,18017719-180178... 29 3.7
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 29 4.9
06_01_1192 + 10249316-10249431,10251263-10251279,10251890-102537... 29 4.9
06_01_1190 + 10231166-10231222,10231318-10234122 29 4.9
12_01_0969 - 9765114-9765664,9767963-9768512,9769507-9769561,976... 28 6.5
11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580 28 6.5
11_01_0782 + 6543906-6544702,6545717-6547850 28 6.5
11_06_0607 + 25437897-25438046,25438180-25438236,25438522-254386... 28 8.6
10_01_0168 - 1883380-1883594,1884572-1888325 28 8.6
06_01_1188 + 10219546-10219664,10220855-10223660 28 8.6
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 28 8.6
01_06_0900 - 32841880-32842078,32842179-32842300,32842621-328428... 28 8.6
>03_02_0781 +
11141469-11141486,11141855-11141978,11142024-11142340,
11143219-11143509,11143751-11143956,11144048-11144327
Length = 411
Score = 219 bits (534), Expect = 2e-57
Identities = 103/155 (66%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Frame = +2
Query: 224 GAGKTSFTRRL-SNKVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMKQYGLGPN 400
G GKT+F RL + + R Y++NLDPA +P+ ANIDIRDTV YKEVMK+YGLGPN
Sbjct: 78 GTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKEYGLGPN 137
Query: 401 GGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLASCCP 580
GGI+T+LNLFSTKF +V+ +IE+ + Y ++DTPGQIE+FTWSASG I+TE AS P
Sbjct: 138 GGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFP 197
Query: 581 TVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
TVV YV+DT RS SPVTFMSNMLYACSILYKTRLP
Sbjct: 198 TVVAYVVDTPRSTSPVTFMSNMLYACSILYKTRLP 232
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSNKVINGSRP-YLVNLDPACREVPYPANIDIRDTVDYKEVMKQ 382
+++G AG+GK+++ L R ++VNLDPA YP + DIR+ + +VM++
Sbjct: 6 LVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEE 65
Query: 383 YGLGPNGGIVTALNLF------STKFGQVVDLIE-------KAGKKHKYCVIDTPGQIEV 523
G+GPNGG++ + L S + D ++ + Y V D PGQIE+
Sbjct: 66 LGMGPNGGLIYCMELLKLLTDPSENHRHLEDNLDDWLDEQLEGYLDDDYLVFDCPGQIEL 125
Query: 524 FTW-SASGTIVTETLASCCPTVVVYVMDTVRSVSPVT-FMSNMLYACSILYKTRLP 685
FT V VY++D+ + VS VT ++S + + S + + LP
Sbjct: 126 FTHVPVLRNFVEHLKRKNFNVCAVYLLDS-QFVSDVTKYISGCMASLSAMIQLELP 180
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 98 LFICIGSKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSF 244
+ IC KK Y G+ + D +G + K C +LG GAGKTSF
Sbjct: 677 MIICHNLKKVYPGKNGNPDKLAVKGLSLALRKGQCFGMLGPNGAGKTSF 725
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSNKVINGSRP-YLVNLDPACREVPYPANID 343
+++G AG+GK+++ L R ++VNLDPA YP + +
Sbjct: 6 LVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTE 52
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 488 YCVIDTPGQIEVFTW-SASGTIVTETLASCCPTVVVYVMDTVRSVSPVT-FMSNMLYACS 661
Y V D PGQIE+FT V VY +D+ + VS VT ++S + + S
Sbjct: 77 YLVFDCPGQIELFTHVPVLRNFVEHLKRKNFNVCAVYFLDS-QFVSDVTKYISGCMASLS 135
Query: 662 ILYKTRLP 685
+ + LP
Sbjct: 136 AMIQLELP 143
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 419 LNLFSTKFGQ-VVDLIE--KAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLASCCPTVV 589
+NL +T F + +V+++ K + +DT I + T S + +TET CC T V
Sbjct: 385 MNLLATSFNERLVEVVRLLKNQPNIRATFVDTYTTIGMATISPNNYGLTETSRGCCGTGV 444
Query: 590 VYVMDTVRSVSPVTFMSNMLY 652
+ V T R T S +Y
Sbjct: 445 IEVGQTCRGRRACTHPSKYIY 465
>06_02_0083 -
11539955-11540257,11540594-11540742,11540938-11541025,
11541151-11541462,11541554-11541709,11541941-11542156,
11542251-11542508,11542740-11542943,11543052-11543096
Length = 576
Score = 31.5 bits (68), Expect = 0.70
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 119 KKRYIGEKMSSDTNKPEGSNAEPNKPI 199
+KRYI +++++D P GS PN+P+
Sbjct: 478 QKRYIEQQLNTDHEGPFGSRVSPNRPV 504
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSNKVINGSRP 286
I+LG AG GKT+ L++K+ NG P
Sbjct: 301 ILLGEAGVGKTAIAEGLAHKIANGDVP 327
>09_03_0029 +
11724581-11724583,11726413-11726610,11726874-11727038,
11727217-11727283,11727645-11727812,11728070-11728194,
11728288-11728446,11728552-11728714,11728795-11728920,
11729000-11729083,11729161-11729528,11729613-11729813,
11729909-11730018,11730113-11730197,11730360-11730488,
11730580-11730667,11730805-11730893,11730968-11731267
Length = 875
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 104 ICIGSKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSF 244
IC KK Y G + D G + K C +LG GAGKTSF
Sbjct: 560 ICHNLKKIYPGRDGNPDKLAVRGLSLAVPKGQCFGMLGPNGAGKTSF 606
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 104 ICIGSKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSF 244
IC KK Y G+ + D G + K C +LG GAGKTSF
Sbjct: 608 ICDNLKKVYHGKDGNPDKLAVRGLSLALPKGQCFGMLGPNGAGKTSF 654
>05_03_0162 -
9050981-9051003,9051141-9052273,9052388-9053310,
9053560-9054615
Length = 1044
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +2
Query: 131 IGEKMSSDTNK-----PEGSNAEPNKPICLIILGMAGAGKTSFTRRLSN 262
+GEK+ DT G N + N + + ++G G GKT+ +++ N
Sbjct: 175 VGEKIEEDTRTLVKMLTNGKNKKQNAVVVVAVVGTGGIGKTTLAKKVFN 223
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSNKVINGSRP-YLV 295
I+LG AG GKT+ L+ ++ NG P YLV
Sbjct: 308 ILLGEAGVGKTAIAEGLALRIANGDVPIYLV 338
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 203 LIILGMAGAGKTSFTRRL 256
++I+GMAGAGKT TR L
Sbjct: 217 VVIVGMAGAGKTKLTRHL 234
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 116 SKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRLSNK 265
S+K + ++ K S E N + L I+GM G GKT+F + + N+
Sbjct: 170 SEKDIVERSRETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE 219
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 119 KKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGSRPYLVN 298
K++ G K+ + + E + ILG +GAGK++F L+ ++ GS V
Sbjct: 110 KQKKEGVKVKKEVYLLNDISGEAPRGQVTAILGPSGAGKSTFLDALAGRIAKGSLEGSVR 169
Query: 299 LD 304
+D
Sbjct: 170 ID 171
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 278 SRPYLVNLDPACREVPYPANIDIRDTVDYK-EVMKQYGLGPNGGIVTALNLFSTKFGQVV 454
+ PYL +L A Y A + I D D+ + +YG + G+ + ++ T FG++
Sbjct: 111 TEPYLQSLARALSHY-YKAQLLILDVTDFSLRIQSKYG-SSSKGLAQSQSISETTFGRMS 168
Query: 455 DLI 463
DLI
Sbjct: 169 DLI 171
>03_04_0172 +
18017164-18017313,18017389-18017499,18017719-18017886,
18017985-18018098,18019070-18019126,18019797-18020475,
18021016-18021174,18021449-18021618
Length = 535
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 227 AGKTSFTRRLSNKVINGSRPYLVN 298
AG+ FT LS+ +IN +RP++VN
Sbjct: 47 AGREIFTNFLSSVMINATRPFVVN 70
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 104 ICIGSKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSF 244
+C KK Y G+ + D G + CL ILG GAGK+SF
Sbjct: 629 VCDDLKKVYHGKDGNPDKFAVRGLSLALPYGECLGILGPNGAGKSSF 675
>06_01_1192 +
10249316-10249431,10251263-10251279,10251890-10253797,
10253880-10254492,10255390-10255392,10257635-10257713,
10258177-10258236,10258536-10258586,10258800-10258948,
10260937-10260985
Length = 1014
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 116 SKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRL 256
SKKR + E + DTN +G P K IC++ GM G GKT+ +R++
Sbjct: 83 SKKRLL-EMI--DTNANDG----PAKVICVV--GMGGLGKTALSRKI 120
>06_01_1190 + 10231166-10231222,10231318-10234122
Length = 953
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 116 SKKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRL 256
SKKR + E + DTN +G P K IC++ GM G GKT+ +R++
Sbjct: 90 SKKRLL-EMI--DTNANDG----PAKVICVV--GMGGLGKTALSRKI 127
>12_01_0969 -
9765114-9765664,9767963-9768512,9769507-9769561,
9769918-9769980,9770547-9771325
Length = 665
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 478 LSRFLYQVYDLSKFC*KQIQCCNYTTIWSKTILLHYFFIVYSISYIN 338
LS Y Y++S +C +C + T W Y F + S SYIN
Sbjct: 334 LSEAGYNHYEISSYCKTGYECKHNVTYWQNRSF--YAFGLGSASYIN 378
>11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580
Length = 1101
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 131 IGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRLSN 262
+ EKM +G E + P+ L I+G G GKT R L N
Sbjct: 171 LAEKMLGRMLLADGEEEEGDGPLVLPIVGGPGMGKTYLARFLFN 214
>11_01_0782 + 6543906-6544702,6545717-6547850
Length = 976
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 179 AEPNKPICLIILGMAGAGKTSFTRRLSN 262
AEP K + I+G G GKT+ R L N
Sbjct: 179 AEPKKLKVISIVGFCGLGKTALARELYN 206
>11_06_0607 +
25437897-25438046,25438180-25438236,25438522-25438602,
25438720-25438777,25438888-25438991,25439064-25439115,
25439232-25439281,25440279-25440443,25440531-25440603,
25440714-25440846,25441146-25441203,25441411-25441458,
25441593-25441676,25441803-25441868,25442419-25442502
Length = 420
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 660 EQAYSMLDINVTGDTLRTVSITYTTTVGQ-HDASVSVTIVPDADHVNTSI*P 508
+Q YS L R + T T+G+ H ++ +V I+P+AD V+ I P
Sbjct: 200 KQVYSKLKFE--SGVHRVQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDP 249
>10_01_0168 - 1883380-1883594,1884572-1888325
Length = 1322
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 173 SNAEPNKPICLI-ILGMAGAGKTSFTRRLSNK 265
++A N+ + ++ I+GMAG GKT+F + + N+
Sbjct: 188 NHASSNRDLLVLPIVGMAGLGKTTFVQLIYNE 219
>06_01_1188 + 10219546-10219664,10220855-10223660
Length = 974
Score = 27.9 bits (59), Expect = 8.6
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGSRPYLVNLDPACREVPYPANIDIRD 352
+N P K IC++ GM G GKT+ R+ ++ ++ N C + + D ++
Sbjct: 183 TNDGPAKVICVV--GMGGLGKTTLARKAYE-----NKEHMKNFS-CCAWITVSQSFDRKE 234
Query: 353 TVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVD-----LIEKAGKKHKYCVIDTPGQI 517
+ K++++Q LG + + L FS K V L+E +K + V+D I
Sbjct: 235 IL--KQMIRQL-LGAD-SLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTI 290
Query: 518 EVFTW 532
+ + W
Sbjct: 291 DAWNW 295
>03_06_0222 + 32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Frame = +1
Query: 451 RRLDRESGKETQVLCYRYARSNRSVHMVSIRHNSDRNTGVMLSHSRSVCNGHST------ 612
R L K V+C Y RS M + N +N + LSH R V G +
Sbjct: 904 RLLTETISKVYVVICVPYGPHTRSWSMDDLLVNVAKNIKMKLSHPRFVIPGDLSEVDFEF 963
Query: 613 -QCVARHIYVQHAVCLLNIVQDSAAVLLLS 699
QC+ +H+ + + Q A LL +
Sbjct: 964 PQCLRKHVQSEISTVSTKRTQGDAKGLLFT 993
>01_06_0900 -
32841880-32842078,32842179-32842300,32842621-32842841,
32843086-32843224,32843350-32843576,32843677-32843788,
32843863-32844063,32845349-32845525
Length = 465
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = -1
Query: 709 ILFMTTIKRQPSLVQY*ASIQHVGHKCDGRHTAYCVH-----YIHY 587
I ++TTI+ S V Y S ++ DG+HT Y + YIH+
Sbjct: 74 ISWVTTIEPGSSTVLYGTSEDNLNFSADGKHTQYTFYNYTSGYIHH 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,353,391
Number of Sequences: 37544
Number of extensions: 371492
Number of successful extensions: 1117
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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