Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1m14
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 267 2e-71
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 267 2e-71
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 267 2e-71
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 265 1e-70
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 70 7e-12
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 69 2e-11
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 69 2e-11
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 69 2e-11
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 66 9e-11
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 66 9e-11
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 66 9e-11
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 66 9e-11
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 66 9e-11
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 65 2e-10
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 65 2e-10
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 61 3e-09
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 61 3e-09
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 61 4e-09
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 32 1.8
BC053734-1|AAH53734.1| 266|Homo sapiens RAS-like, family 12 pro... 32 2.4
AF233588-1|AAF60286.1| 266|Homo sapiens Ris protein. 32 2.4
BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion (au... 31 5.5
BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein. 31 5.5
BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member... 31 5.5
AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member... 31 5.5
AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein. 31 5.5
BC035054-1|AAH35054.1| 221|Homo sapiens RAB28, member RAS oncog... 30 9.6
BC022031-1|AAH22031.1| 421|Homo sapiens chromosome 6 open readi... 30 9.6
BC018067-1|AAH18067.1| 95|Homo sapiens RAB28 protein protein. 30 9.6
AL133472-2|CAI19668.1| 421|Homo sapiens RP1-70A9.1 protein. 30 9.6
AL133472-1|CAI19667.1| 751|Homo sapiens RP1-70A9.1 protein. 30 9.6
AL121788-2|CAI22499.1| 421|Homo sapiens RP1-70A9.1 protein. 30 9.6
AL121788-1|CAI22498.1| 751|Homo sapiens RP1-70A9.1 protein. 30 9.6
AK055538-1|BAB70945.1| 421|Homo sapiens protein ( Homo sapiens ... 30 9.6
AF498955-1|AAM21103.1| 220|Homo sapiens small GTP binding prote... 30 9.6
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 267 bits (655), Expect = 2e-71
Identities = 123/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Frame = +2
Query: 185 PNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIRDTVD 361
P P+CL++LGMAG+GKT+F +RL+ + G+ PY++NLDPA EVP+PANIDIRDTV
Sbjct: 16 PRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVK 75
Query: 362 YKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSAS 541
YKEVMKQYGLGPNGGIVT+LNLF+T+F QV+ IEKA KY +IDTPGQIEVFTWSAS
Sbjct: 76 YKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSAS 135
Query: 542 GTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPF 688
GTI+TE LAS PTVV+YVMDT RS +PVTFMSNMLYACSILYKT+LPF
Sbjct: 136 GTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPF 184
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 267 bits (655), Expect = 2e-71
Identities = 123/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Frame = +2
Query: 185 PNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIRDTVD 361
P P+CL++LGMAG+GKT+F +RL+ + G+ PY++NLDPA EVP+PANIDIRDTV
Sbjct: 16 PRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVK 75
Query: 362 YKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSAS 541
YKEVMKQYGLGPNGGIVT+LNLF+T+F QV+ IEKA KY +IDTPGQIEVFTWSAS
Sbjct: 76 YKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSAS 135
Query: 542 GTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPF 688
GTI+TE LAS PTVV+YVMDT RS +PVTFMSNMLYACSILYKT+LPF
Sbjct: 136 GTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPF 184
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 267 bits (655), Expect = 2e-71
Identities = 123/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Frame = +2
Query: 185 PNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIRDTVD 361
P P+CL++LGMAG+GKT+F +RL+ + G+ PY++NLDPA EVP+PANIDIRDTV
Sbjct: 16 PRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVK 75
Query: 362 YKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSAS 541
YKEVMKQYGLGPNGGIVT+LNLF+T+F QV+ IEKA KY +IDTPGQIEVFTWSAS
Sbjct: 76 YKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSAS 135
Query: 542 GTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPF 688
GTI+TE LAS PTVV+YVMDT RS +PVTFMSNMLYACSILYKT+LPF
Sbjct: 136 GTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPF 184
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 265 bits (649), Expect = 1e-70
Identities = 122/166 (73%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
Frame = +2
Query: 194 PICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIRDTVDYKE 370
P+CL++LGMAG+GKT+F +RL+ + G+ PY++NLDPA EVP+PANIDIRDTV YKE
Sbjct: 3 PVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 62
Query: 371 VMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTI 550
VMKQYGLGPNGGIVT+LNLF+T+F QV+ IEKA KY +IDTPGQIEVFTWSASGTI
Sbjct: 63 VMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTI 122
Query: 551 VTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPF 688
+TE LAS PTVV+YVMDT RS +PVTFMSNMLYACSILYKT+LPF
Sbjct: 123 ITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPF 168
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 70.1 bits (164), Expect = 7e-12
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMK 379
+++G AG+GK+++ + + +N S +VNLDPA Y +DIR+ ++ +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMVDIRELIEVDDVME 65
Query: 380 QYGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIV 553
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 66 DDSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKQL 123
Query: 554 TETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 68.5 bits (160), Expect = 2e-11
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMK 379
+++G AG+GK+++ + + +N S +VNLDPA Y DIR+ ++ +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMADIRELIEVDDVME 65
Query: 380 QYGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIV 553
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 66 DDSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKQL 123
Query: 554 TETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 68.5 bits (160), Expect = 2e-11
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMK 379
+++G AG+GK+++ + + +N S +VNLDPA Y DIR+ ++ +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMADIRELIEVDDVME 65
Query: 380 QYGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIV 553
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 66 DDSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKHL 123
Query: 554 TETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 68.5 bits (160), Expect = 2e-11
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Frame = +2
Query: 206 IILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMK 379
+++G AG+GK+++ + + +N S +VNLDPA Y DIR+ ++ +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMADIRELIEVDDVME 65
Query: 380 QYGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIV 553
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 66 DDSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKQL 123
Query: 554 TETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 66.5 bits (155), Expect = 9e-11
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 66.5 bits (155), Expect = 9e-11
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 66.5 bits (155), Expect = 9e-11
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 66.5 bits (155), Expect = 9e-11
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 66.5 bits (155), Expect = 9e-11
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 65.3 bits (152), Expect = 2e-10
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P + G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 65.3 bits (152), Expect = 2e-10
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPYPANIDIR 349
+ A P + G G+GKT++ +S + G R +VNLDPA +PY +D+
Sbjct: 2 AGAAPTTAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVG 61
Query: 350 DTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFT 529
+ V +VM LGPNGG++ + + ++ + Y + D PGQ+E+ T
Sbjct: 62 ELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL--RGHYFLFDCPGQVELCT 119
Query: 530 -WSASGTIVTETLASCCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
A +I ++ V+++D+ P F+S + + + + LP
Sbjct: 120 HHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELP 172
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 61.3 bits (142), Expect = 3e-09
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +2
Query: 209 ILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMKQ 382
++G A A ++++ + + +N S +VNLDPA Y DIR+ ++ +VM+
Sbjct: 8 VMGPAHAKRSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMADIRELIEVDDVMED 66
Query: 383 YGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVT 556
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 67 DSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKQLV 124
Query: 557 ETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 61.3 bits (142), Expect = 3e-09
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +2
Query: 209 ILGMAGAGKTSFTRRLSN--KVINGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMKQ 382
++G A A ++++ + + +N S +VNLDPA Y DIR+ ++ +VM+
Sbjct: 8 VMGPAHAKRSTYCATMVQHCEALNRS-VQVVNLDPAAEHFNYSVMADIRELIEVDDVMED 66
Query: 383 YGL--GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVT 556
L GPNGG+V + F+ F + + + + Y + D PGQIE++T +
Sbjct: 67 DSLRFGPNGGLVFCMEYFANNFDWLENCLGHV--EDDYILFDCPGQIELYTHLPVMKQLV 124
Query: 557 ETLASCCPTVV-VYVMDTVRSVSPVTFMSNMLYACSILYKTRLP 685
+ L V V+++D+ V F+S +L A S + +P
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIP 168
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 60.9 bits (141), Expect = 4e-09
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +2
Query: 290 LVNLDPACREVPYPANIDIRDTVDYKEVMKQYGL--GPNGGIVTALNLFSTKFGQVVDLI 463
+VNLDPA Y DIR+ ++ +VM+ L GPNGG+V + F+ F + + +
Sbjct: 66 VVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCL 125
Query: 464 EKAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLASCCPTVV-VYVMDTVRSVSPVTFMS 640
+ Y + D PGQIE++T + + L V V+++D+ V F+S
Sbjct: 126 GHV--EDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFIS 183
Query: 641 NMLYACSILYKTRLP 685
+L A S + +P
Sbjct: 184 GILAALSAMISLEIP 198
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 1.8
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKV-INGSRPYLVNLDPACREVPY 328
+ A P ++G G+GKT++ +S + G R +VNLDPA +PY
Sbjct: 2 AGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPY 54
>BC053734-1|AAH53734.1| 266|Homo sapiens RAS-like, family 12
protein.
Length = 266
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 143 MSSDTNKPEGSNAEPNKP--ICLIILGMAGAGKTSFT-RRLSNKVINGSRPYLVNLDPAC 313
MSS KP + + P + L ILG GAGK++ T + L+ + I+ P L + +
Sbjct: 1 MSSVFGKPRAGSGPQSAPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSE 60
Query: 314 REVPY-PANIDIRDTVD 361
V + P ++ + DT D
Sbjct: 61 ETVDHQPVHLRVMDTAD 77
>AF233588-1|AAF60286.1| 266|Homo sapiens Ris protein.
Length = 266
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 143 MSSDTNKPEGSNAEPNKP--ICLIILGMAGAGKTSFT-RRLSNKVINGSRPYLVNLDPAC 313
MSS KP + + P + L ILG GAGK++ T + L+ + I+ P L + +
Sbjct: 1 MSSVFGKPRAGSGPQSAPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSE 60
Query: 314 REVPY-PANIDIRDTVD 361
V + P ++ + DT D
Sbjct: 61 ETVDHQPVHLRVMDTAD 77
>BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion
(autosomal dominant; torsin A) protein.
Length = 332
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGS-RPYLVNLDPACREVPYPANIDI 346
+N +P KP+ L + G G GK ++ ++ + G V+L A P+ +NI +
Sbjct: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
>BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGS-RPYLVNLDPACREVPYPANIDI 346
+N +P KP+ L + G G GK ++ ++ + G V+L A P+ +NI +
Sbjct: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
>BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGS-RPYLVNLDPACREVPYPANIDI 346
+N +P KP+ L + G G GK ++ ++ + G V+L A P+ +NI +
Sbjct: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
>AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGS-RPYLVNLDPACREVPYPANIDI 346
+N +P KP+ L + G G GK ++ ++ + G V+L A P+ +NI +
Sbjct: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
>AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein.
Length = 332
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 SNAEPNKPICLIILGMAGAGKTSFTRRLSNKVINGS-RPYLVNLDPACREVPYPANIDI 346
+N +P KP+ L + G G GK ++ ++ + G V+L A P+ +NI +
Sbjct: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
>BC035054-1|AAH35054.1| 221|Homo sapiens RAB28, member RAS oncogene
family protein.
Length = 221
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLSNKVINGSRPYLVNLDPACREVPYPANIDI 346
++ + +++LG +GKTS T + + + LD R + P N+++
Sbjct: 10 DRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNV 62
>BC022031-1|AAH22031.1| 421|Homo sapiens chromosome 6 open reading
frame 199 protein.
Length = 421
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>BC018067-1|AAH18067.1| 95|Homo sapiens RAB28 protein protein.
Length = 95
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLSNKVINGSRPYLVNLDPACREVPYPANIDI 346
++ + +++LG +GKTS T + + + LD R + P N+++
Sbjct: 10 DRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNV 62
>AL133472-2|CAI19668.1| 421|Homo sapiens RP1-70A9.1 protein.
Length = 421
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>AL133472-1|CAI19667.1| 751|Homo sapiens RP1-70A9.1 protein.
Length = 751
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>AL121788-2|CAI22499.1| 421|Homo sapiens RP1-70A9.1 protein.
Length = 421
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>AL121788-1|CAI22498.1| 751|Homo sapiens RP1-70A9.1 protein.
Length = 751
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>AK055538-1|BAB70945.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ30976 fis, clone HHDPC2000055, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 421
Score = 29.9 bits (64), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLS 259
+KP+C ++ G G GKT+ R ++
Sbjct: 28 SKPVCFVVFGKPGVGKTTLARYIT 51
>AF498955-1|AAM21103.1| 220|Homo sapiens small GTP binding protein
RAB28 protein.
Length = 220
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 188 NKPICLIILGMAGAGKTSFTRRLSNKVINGSRPYLVNLDPACREVPYPANIDI 346
++ + +++LG +GKTS T + + + LD R + P N+++
Sbjct: 10 DRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNV 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,732,604
Number of Sequences: 237096
Number of extensions: 2092956
Number of successful extensions: 5261
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5234
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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