Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m09
         (387 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   9.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 248 HPGANVKYNGTTFLTGTH 301
           HPG   +Y+     +GTH
Sbjct: 158 HPGMTFRYHFNVHNSGTH 175


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = +3

Query: 3   LPLHICVTFCKNFTLMR 53
           +P H C  +C+ F +++
Sbjct: 273 MPKHACSEYCRVFKMLQ 289


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 135 TPPGTKWLLEPKNTK 91
           TPP ++ L+ PK+ K
Sbjct: 107 TPPNSEPLVSPKSEK 121


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 161 AVVLKNPDKLHLVLNGYWS 105
           A+ LKNP+   LV  G W+
Sbjct: 84  ALKLKNPNLKTLVAIGGWN 102


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 149 KNPDKLHLVLNGYWSPKTPKQNTI 78
           KNPD   ++  G W+  + K +T+
Sbjct: 89  KNPDLKIILSMGGWNEGSYKYSTV 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,541
Number of Sequences: 336
Number of extensions: 2140
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)