Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m09
         (387 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272...    26   9.1  
01_06_1543 - 38138253-38138855,38139000-38139239                       26   9.1  

>01_06_1795 -
           39925019-39926029,39926265-39926408,39927200-39927277,
           39927722-39927838,39927925-39927981,39928492-39928623,
           39928725-39928922,39929364-39929474,39929570-39929785,
           39929879-39930064,39930590-39931192
          Length = 950

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 177 RVE*SSRCIKEPRQTPPGTKWLLEPKNTKTKH 82
           + E +SRC++   Q  P  +W ++  N   +H
Sbjct: 415 KTEIASRCVELAEQFAPSNQWFIQTMNKVFEH 446


>01_06_1543 - 38138253-38138855,38139000-38139239
          Length = 280

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 164 AAVVLKNPDKLHLVLNGYWSPKTPKQNTI 78
           AAV    P +  L+++G+W   TP  N +
Sbjct: 31  AAVAGAQPPRAILIVSGHWETATPTVNVV 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,636,527
Number of Sequences: 37544
Number of extensions: 208116
Number of successful extensions: 388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)