Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m09
         (387 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.1  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         22   9.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 327 GRLLRSQIRC-VPVRKVVPLYLTFAPGCSLNTRSPMTSHYD 208
           G L    IRC VP  K +  +++  P CS      M  H D
Sbjct: 381 GNLFAQTIRCCVPDLKSLREFVSRPPACSTRLHCTMIRHDD 421


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = -3

Query: 367 MHLYVVRLHCVAFWPS----ASVPNKVRPSKESGSIVFNIR 257
           ++ Y +RL   + W      ASV N+ RP  E+ + +++IR
Sbjct: 818 LYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIR 858


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 316  SVPNKVRPSKESGSIV 269
            ++PNKV+PS  +G+ V
Sbjct: 1280 AIPNKVKPSPLAGAAV 1295


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 152 LKNPDKLHLVLNGYWSPKTPKQNTIIFEVK 63
           L+NP       NG WS K+P+   I  E K
Sbjct: 8   LRNPWGNEAEWNGPWSDKSPEWRYIPDEQK 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,940
Number of Sequences: 2352
Number of extensions: 9462
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)