Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m09
         (387 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S60085-1|AAB20108.1|  679|Homo sapiens ADMLX protein.                  29   4.0  
BX538024-1|CAD97970.1|  979|Homo sapiens hypothetical protein pr...    29   4.0  
BC133009-1|AAI33010.1|  979|Homo sapiens ubiquitin specific pept...    29   4.0  
BC133007-1|AAI33008.1|  979|Homo sapiens USP37 protein protein.        29   4.0  
AL832645-1|CAD89955.1|  979|Homo sapiens hypothetical protein pr...    29   4.0  
AB046814-1|BAB13420.1|  931|Homo sapiens KIAA1594 protein protein.     29   4.0  

>S60085-1|AAB20108.1|  679|Homo sapiens ADMLX protein.
          Length = 679

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 6   PLHICVTFCKNFTLMRLKKF--HFKNNCVLFWC 98
           P   C + C +  + R+  F  HF+NN  L WC
Sbjct: 44  PARSCASRCLSLQITRISAFFQHFQNNGSLVWC 76


>BX538024-1|CAD97970.1|  979|Homo sapiens hypothetical protein
           protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -1

Query: 282 VVPLYLTFAPGCSLNTRSPMTSHYDRFYE*CVPV*RVE*SSRCIKEPRQTPPGTKWLLEP 103
           ++P YLT +  C+ NT+ P T  +        P+   +  + CI  P  + P  K+  + 
Sbjct: 583 IIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNSCITSP--STPSKKFTFKS 640

Query: 102 KNT 94
           K++
Sbjct: 641 KSS 643


>BC133009-1|AAI33010.1|  979|Homo sapiens ubiquitin specific
           peptidase 37 protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -1

Query: 282 VVPLYLTFAPGCSLNTRSPMTSHYDRFYE*CVPV*RVE*SSRCIKEPRQTPPGTKWLLEP 103
           ++P YLT +  C+ NT+ P T  +        P+   +  + CI  P  + P  K+  + 
Sbjct: 583 IIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNSCITSP--STPSKKFTFKS 640

Query: 102 KNT 94
           K++
Sbjct: 641 KSS 643


>BC133007-1|AAI33008.1|  979|Homo sapiens USP37 protein protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -1

Query: 282 VVPLYLTFAPGCSLNTRSPMTSHYDRFYE*CVPV*RVE*SSRCIKEPRQTPPGTKWLLEP 103
           ++P YLT +  C+ NT+ P T  +        P+   +  + CI  P  + P  K+  + 
Sbjct: 583 IIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNSCITSP--STPSKKFTFKS 640

Query: 102 KNT 94
           K++
Sbjct: 641 KSS 643


>AL832645-1|CAD89955.1|  979|Homo sapiens hypothetical protein
           protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -1

Query: 282 VVPLYLTFAPGCSLNTRSPMTSHYDRFYE*CVPV*RVE*SSRCIKEPRQTPPGTKWLLEP 103
           ++P YLT +  C+ NT+ P T  +        P+   +  + CI  P  + P  K+  + 
Sbjct: 583 IIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNSCITSP--STPSKKFTFKS 640

Query: 102 KNT 94
           K++
Sbjct: 641 KSS 643


>AB046814-1|BAB13420.1|  931|Homo sapiens KIAA1594 protein protein.
          Length = 931

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -1

Query: 282 VVPLYLTFAPGCSLNTRSPMTSHYDRFYE*CVPV*RVE*SSRCIKEPRQTPPGTKWLLEP 103
           ++P YLT +  C+ NT+ P T  +        P+   +  + CI  P  + P  K+  + 
Sbjct: 535 IIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNSCITSP--STPSKKFTFKS 592

Query: 102 KNT 94
           K++
Sbjct: 593 KSS 595


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,828,319
Number of Sequences: 237096
Number of extensions: 1279297
Number of successful extensions: 1935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)