Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1m01
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro...    31   2.1  
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P...    31   2.1  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   6.3  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    29   6.3  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    29   6.3  

>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p
           protein.
          Length = 1761

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 249 LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 419
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 72  LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 131

Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVY 521
                C+   R   +  +++++ + Y+   +K++
Sbjct: 132 DLMD-CVSADRFEAVESVEELHKRAYELNQNKLF 164


>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
           isoform C protein.
          Length = 1997

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 249 LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 419
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 308 LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 367

Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVY 521
                C+   R   +  +++++ + Y+   +K++
Sbjct: 368 DLMD-CVSADRFEAVESVEELHKRAYELNQNKLF 400


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 539  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 637
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 485 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 664
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 665 FLEK 676
            + K
Sbjct: 512 NMGK 515


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 485 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 664
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 723 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 665 FLEK 676
            + K
Sbjct: 783 NMGK 786


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,733,877
Number of Sequences: 53049
Number of extensions: 709505
Number of successful extensions: 2075
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)