Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1l24
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 241 4e-64
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 232 2e-61
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 143 1e-34
06_01_0539 + 3869156-3869908 139 2e-33
06_01_0529 + 3831100-3831852 139 2e-33
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 125 3e-29
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 121 6e-28
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 120 8e-28
06_01_0479 + 3419657-3420337 113 9e-26
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 97 9e-21
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 89 6e-20
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 73 2e-13
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 65 4e-11
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 40 0.002
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 38 0.006
08_02_0230 - 14572854-14574632 31 0.64
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 31 1.1
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 30 1.5
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 30 2.0
06_01_1007 + 7846266-7846526,7848368-7848420,7849231-7849432,784... 29 2.6
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 2.6
10_01_0108 + 1337009-1338190 29 3.4
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 29 4.5
01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679 28 6.0
12_02_0683 + 22006770-22006935,22007030-22007274,22007524-220077... 28 7.9
01_06_0845 - 32389889-32389909,32390074-32390241,32390334-323904... 28 7.9
06_01_1080 + 8836289-8836347,8836525-8836783,8836911-8837444,883... 25 9.0
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 241 bits (590), Expect = 4e-64
Identities = 116/197 (58%), Positives = 150/197 (76%), Gaps = 8/197 (4%)
Frame = +2
Query: 107 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 286
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 287 PGANKRIFHIDEHVG--------MAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYL 442
G+N+RI + H G MAVAGL +D RQIV A+SEA++Y YG P+ +K L
Sbjct: 61 EGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKEL 120
Query: 443 NERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQA 622
+RV+ Y+H TLY +RP+GC V++G + D +GPQ+YM++PSGVS+ YFG A+GK +QA
Sbjct: 121 ADRVASYVHLCTLYWWLRPFGCGVILGGY-DRDGPQLYMIEPSGVSYKYFGAALGKGRQA 179
Query: 623 AKTEIEKLKLGDLTVKE 673
AKTEIEKLKL +LT +E
Sbjct: 180 AKTEIEKLKLSELTCRE 196
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 232 bits (567), Expect = 2e-61
Identities = 104/175 (59%), Positives = 139/175 (79%)
Frame = +2
Query: 107 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 286
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMIL 60
Query: 287 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 466
G+N+R+ + H G+AVAGL +D RQIV A+SEA++Y YG P+P+K L +RV+ Y+
Sbjct: 61 KGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYV 120
Query: 467 HAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKT 631
H TLY +RP+GC V++G + D +GPQ+YM++PSG+S+ YFG A+GK +QAAKT
Sbjct: 121 HLCTLYWWLRPFGCGVILGGY-DRDGPQLYMIEPSGLSYKYFGAALGKGRQAAKT 174
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 143 bits (346), Expect = 1e-34
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Frame = +2
Query: 122 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANK 301
T YD + FSP+GR+FQVEYA +A++ T IGL+ KDGVV AVEK +TS L EP + +
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVE 78
Query: 302 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERV---SMYMHA 472
+I IDEH+G A++GLI+DAR +VE AR E N+R YG P+ ++ + + ++
Sbjct: 79 KIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGE 138
Query: 473 YTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKL 652
S RP+G S+++ D GP +Y DPSG + A+G + A + +++
Sbjct: 139 GDEESMSRPFGVSLLI-AGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 197
Query: 653 GDLTV 667
LTV
Sbjct: 198 KSLTV 202
>06_01_0539 + 3869156-3869908
Length = 250
Score = 139 bits (337), Expect = 2e-33
Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +2
Query: 128 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 304
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 305 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 484
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 485 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLT 664
+RP+G S + W + G Q+YM DPSG + AVG QAA++ +++ +T
Sbjct: 125 GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMT 184
Query: 665 VKELV 679
+E V
Sbjct: 185 REEAV 189
>06_01_0529 + 3831100-3831852
Length = 250
Score = 139 bits (337), Expect = 2e-33
Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +2
Query: 128 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 304
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 305 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 484
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 485 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLT 664
+RP+G S + W + G Q+YM DPSG + AVG QAA++ +++ +T
Sbjct: 125 GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMT 184
Query: 665 VKELV 679
+E V
Sbjct: 185 REEAV 189
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 125 bits (302), Expect = 3e-29
Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +2
Query: 128 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 307
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 74 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 133
Query: 308 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 487
+D H+ +A AGL +DAR ++ AR E ++R PV ++Y+ ++ YT
Sbjct: 134 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 193
Query: 488 AVRPYGCSVVMGTWTDY-EGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLT 664
VRP+G S ++ + Y E P +Y DPSG ++ A G+ + + +EK D +
Sbjct: 194 GVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK-NYKDTS 252
Query: 665 VKELV 679
KE +
Sbjct: 253 GKETI 257
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 121 bits (291), Expect = 6e-28
Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 1/176 (0%)
Frame = +2
Query: 119 GTGYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGA 295
G GYD + FSP+GR++QVEYA KAV+++G T IG+RGKD V +K + KL + +
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 296 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY 475
+F I +++G+ GL +DAR +V AR+EA+ +R ++G +P+ L + ++ Y
Sbjct: 66 VTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVY 125
Query: 476 TLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 643
T ++ +RP G ++ + + + Q++ DP+G F + + G +Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 181
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 120 bits (290), Expect = 8e-28
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Frame = +2
Query: 128 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 307
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKI 63
Query: 308 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 487
+D H+ +A AGL +DAR ++ AR E ++R V ++Y+ ++ YT
Sbjct: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSG 123
Query: 488 AVRPYGCSVVMGTWTDY-EGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 643
VRP+G S ++ + Y + P +Y DPSG ++ A G+ + + +EK
Sbjct: 124 GVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
>06_01_0479 + 3419657-3420337
Length = 226
Score = 113 bits (273), Expect = 9e-26
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Frame = +2
Query: 191 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQ 367
+A+ N+G+ +G+ DGVV EK +TSKL + + ++++ ID H+ AVAG++SDA
Sbjct: 2 EAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANI 61
Query: 368 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 547
++ TAR A Y Y P+P++ L + + YT + +RP+G S + W + G
Sbjct: 62 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 121
Query: 548 QMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTVKELV 679
Q+YM DPSG + AVG QAA++ +++ LT +E V
Sbjct: 122 QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAV 165
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 97.5 bits (232), Expect = 9e-21
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Frame = +2
Query: 128 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGK-----------------------D 238
Y S + FSP G++ Q+E+A AV + T +G++G +
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKGRGAAN 65
Query: 239 GVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYG 418
GVV A EK + S L + + ++I + ++G+ +G+ D R +V +R +A Y Y
Sbjct: 66 GVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYK 125
Query: 419 SPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGC 598
+P+ L + M +T VRP+G S+++ + D GPQ+Y +DPSG FS+
Sbjct: 126 ETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSGSYFSWKAS 184
Query: 599 AVGKAKQAAKTEIEKLKLGDLTVKELV 679
A+GK AKT +EK D+ + + +
Sbjct: 185 AMGKNVSNAKTFLEKRYTEDMELDDAI 211
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 88.6 bits (210), Expect(2) = 6e-20
Identities = 47/148 (31%), Positives = 80/148 (54%)
Frame = +2
Query: 236 DGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQY 415
+GVV A EK + S L + + ++I + ++G+ +G+ D R +V +R +A Y Y
Sbjct: 102 NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 161
Query: 416 GSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFG 595
+P+ L + M +T VRP+G S+++ + D GPQ+Y +DPSG FS+
Sbjct: 162 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSGSYFSWKA 220
Query: 596 CAVGKAKQAAKTEIEKLKLGDLTVKELV 679
A+GK AKT +EK D+ + + +
Sbjct: 221 SAMGKNVSNAKTFLEKRYTEDMELDDAI 248
Score = 26.6 bits (56), Expect(2) = 6e-20
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 152 SPDGRVFQVEYAAKAVENSGTVIGLR 229
SP G++ Q+E+A AV + T +G++
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIK 69
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Frame = +2
Query: 179 EYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLIS 355
+YA AV+ +G T +G+RG D V + KL++P +F I + +G+ G+
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPG 143
Query: 356 DARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYG-CSVVMGTWT 532
D R I + AR+ A+ +R ++G + L + ++ T ++ +RPYG S++ G
Sbjct: 144 DGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDE 203
Query: 533 DYEGPQMYMLDPSGVSFSYFGCAVG-KAKQAAKTEIEKLK 649
+ P+++ DP+G F++ + G K K+ E++K
Sbjct: 204 EKGTPELFTCDPAGQFFAHKATSAGPKEKEVMNFLEERMK 243
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 65.3 bits (152), Expect = 4e-11
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Frame = +2
Query: 191 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQI 370
+AV+ +GLR + V A S+L +++F + +H G+A+AGL +D R +
Sbjct: 2 EAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVL 59
Query: 371 VETARSEASNYRSQYGSPVPLKYLNERVS------MYMHAYTL----------------- 481
RSE N+ Y +P+P+ L R++ MY+ T+
Sbjct: 60 SRFLRSECINHAFVYDAPLPVSRLALRLADKAQPDMYIFGITICPTTFLWIMSVSLMVLQ 119
Query: 482 ----YSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLK 649
S RPYG +++ D G +Y PSG F Y A+G QAAKT +E+
Sbjct: 120 VCTQRSWKRPYGVGLLV-AGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRF 178
Query: 650 LG--DLTVKELV 679
G D T ++L+
Sbjct: 179 EGYNDYTPEQLI 190
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 212 TVIGLRGKDGVVFAVEKLITSKLYEPG-ANKRIFHIDEHVGMAVAGLISDARQIVETARS 388
T++G+ GVV A + ++ +Y A+ +I + ++V + +G +D + I E R
Sbjct: 27 TIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYVRY 86
Query: 389 EASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDP 568
+ Q G P +K + + AY + ++ +++G W YEG Q++ +
Sbjct: 87 FLHQHTIQLGQPATVKVAANLIRLL--AYQNKNMLQ---AGMIVGGWDKYEGGQIFSVPL 141
Query: 569 SG 574
G
Sbjct: 142 GG 143
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 212 TVIGLRGKDGVVFAVEKLITSKLYEPG-ANKRIFHIDEHVGMAVAGLISDARQIVETARS 388
T++G+ GVV A + ++ +Y A+ +I + ++V + +G +D + I + R
Sbjct: 27 TIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYVRY 86
Query: 389 EASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDP 568
+ Q G P +K + + AY + ++ +++G W YEG Q++ +
Sbjct: 87 FLHQHTIQLGQPATVKVAANLIRLL--AYQNKNMLQ---AGMIVGGWDKYEGGQIFSVPL 141
Query: 569 SG 574
G
Sbjct: 142 GG 143
>08_02_0230 - 14572854-14574632
Length = 592
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 610 SQTGSKNRDRKAKTWRPHSEGAC 678
+Q G+ + +RK TWR HS GAC
Sbjct: 502 NQDGTDHINRKIATWRTHSAGAC 524
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 83 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTV-IGLRGKDGVVFAV 256
+ I C + S G + +F P G ++QV Y+ A ENS T GL + +V +
Sbjct: 1957 RIITACSTVDSKGNDFKALIYEFMPRGDLYQVLYSTCADENSSTSHFGLAQRVSIVMDI 2015
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 530 SMCP*RLSNHMAEQHCIVCMRACTLKLVHLNTSVVLDCHTEICSLTPLNEQSRQFVLH 357
++C LSNH ++ V R + + S++ DC T + S +N Q Q H
Sbjct: 412 NVCVAFLSNHNTKEDGTVTFRGQKYFVARRSISILADCKTVVFSTQHVNSQHNQRTFH 469
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 444 MNEFQCTCTHTHYTVLFGHMVAQSLWAHG--QTM 539
M C CT T+ HMV + +WA G QTM
Sbjct: 451 MGSASCICTDKTGTLTTNHMVVEKIWASGAAQTM 484
>06_01_1007 +
7846266-7846526,7848368-7848420,7849231-7849432,
7849526-7849609,7850005-7850188,7850605-7850741,
7850875-7850939,7851093-7851762
Length = 551
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 480 YTVLFGHMVAQSLWAHG 530
YT L GH V QS WAHG
Sbjct: 427 YTELPGHSVVQSRWAHG 443
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 255 TANTTPSFPRRPITVPEFSTAFAAYSTWKTRPS 157
+++++ FP P++ PE S+A AA S W + PS
Sbjct: 32 SSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPS 64
>10_01_0108 + 1337009-1338190
Length = 393
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 503 GCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTVKEL 676
GCS+++ TW D G ++ ML + F ++ + + A + K +L D + E+
Sbjct: 106 GCSIILDTWLDENGRRLMMLGAHSIIGLTFIRSIHLSSE-AYNDAYKFRLLDSCIDEI 162
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 416 GSPVPLKYLNERVSMYMHAYT 478
G P+P++Y NER ++HA T
Sbjct: 123 GKPIPMEYHNERARNWVHART 143
>01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679
Length = 568
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 336 AMPTCSSIWNILLFAPGSYN-FDVINFSTANTTPSFPRRPITVPEFSTAFAAYSTW 172
A+P S IW LL A + N FD++ ++ P P S +A+ S W
Sbjct: 396 AIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQW 451
>12_02_0683 +
22006770-22006935,22007030-22007274,22007524-22007727,
22007847-22007939,22008015-22008107,22008196-22008537,
22008675-22008737,22008812-22008892
Length = 428
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 544 PSDVYARSQWCIFFIFWLRSRKSQTGSKNRDRKAKTWRPHSEG 672
P DV + QW +W + +KN+ ++ PHS G
Sbjct: 184 PDDV-EKDQWIPLIKYWKSKKGKALSAKNKRSRSMLQNPHSAG 225
>01_06_0845 -
32389889-32389909,32390074-32390241,32390334-32390453,
32390982-32391068,32391149-32391217,32391448-32391510,
32391648-32391989,32392245-32392337,32392457-32392660,
32392910-32393154,32393249-32393414
Length = 525
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 544 PSDVYARSQWCIFFIFWLRSRKSQTGSKNRDRKAKTWRPHSEG 672
P DV + QW +W + +KN+ ++ PHS G
Sbjct: 184 PDDV-EKDQWIPLIKYWKSKKGKALSAKNKRSRSMLQNPHSAG 225
>06_01_1080 +
8836289-8836347,8836525-8836783,8836911-8837444,
8837527-8837636,8843938-8844129,8845062-8845203
Length = 431
Score = 24.6 bits (51), Expect(2) = 9.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 375 STICLASDMS-PATAMPTCSSIWNILLFAPGSYNFDVINF 259
S ICL + ++ P T+ P SS + + G YNF V+NF
Sbjct: 99 SLICLLTRVAKPTTSWP--SSEHTVYHYG-GGYNFTVLNF 135
Score = 21.4 bits (43), Expect(2) = 9.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 213 VPEFSTAFAAYSTWKTRPS 157
VP F A + S+W RPS
Sbjct: 172 VPAFDYAVVSASSWFYRPS 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,280,098
Number of Sequences: 37544
Number of extensions: 389394
Number of successful extensions: 1070
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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