Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1l01
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94216-1|CAA63907.1|  419|Homo sapiens VEGF-C protein.                 33   0.81 
U58111-1|AAB02909.1|  419|Homo sapiens FLT4 ligand DHM protein.        33   0.81 
U43142-1|AAA85214.1|  419|Homo sapiens vascular endothelial grow...    33   0.81 
CR541897-1|CAG46695.1|  419|Homo sapiens VEGFC protein.                33   0.81 
BC063685-1|AAH63685.1|  419|Homo sapiens vascular endothelial gr...    33   0.81 
BC035212-1|AAH35212.1|  419|Homo sapiens vascular endothelial gr...    33   0.81 
BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal...    33   0.81 
AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.      33   0.81 

>X94216-1|CAA63907.1|  419|Homo sapiens VEGF-C protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>U58111-1|AAB02909.1|  419|Homo sapiens FLT4 ligand DHM protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>U43142-1|AAA85214.1|  419|Homo sapiens vascular endothelial growth
           factor related protein protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>CR541897-1|CAG46695.1|  419|Homo sapiens VEGFC protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>BC063685-1|AAH63685.1|  419|Homo sapiens vascular endothelial
           growth factor C protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>BC035212-1|AAH35212.1|  419|Homo sapiens vascular endothelial
           growth factor C protein.
          Length = 419

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 606 RCANCANPTALWCTR-KTRQLSKFYWKITLPLLMLTKPPISKTINH 740
           RC  C N   L C    T  LSK  ++IT+PL    KP      NH
Sbjct: 161 RCGGCCNSEGLQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANH 206


>BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal
           protein L48 protein.
          Length = 212

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +2

Query: 221 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 400
           + L+ +R    +  HG  K   +  AE+P       K+   KV   +I LGT Y+YGV  
Sbjct: 40  ILLSISRPYKTKPTHGIGKYKHLIKAEEP-------KKKKGKVEVRAINLGTDYEYGVL- 91

Query: 401 PNAASTSSNVTMTRGTANF--DIKEFKSMFIVFKGITPTKTVE 523
            N   T+ ++T+    A +  ++    S+ +      PTKT+E
Sbjct: 92  -NIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE 133


>AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.
          Length = 212

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +2

Query: 221 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 400
           + L+ +R    +  HG  K   +  AE+P       K+   KV   +I LGT Y+YGV  
Sbjct: 40  ILLSISRPYKTKPTHGIGKYKHLIKAEEP-------KKKKGKVEVRAINLGTDYEYGVL- 91

Query: 401 PNAASTSSNVTMTRGTANF--DIKEFKSMFIVFKGITPTKTVE 523
            N   T+ ++T+    A +  ++    S+ +      PTKT+E
Sbjct: 92  -NIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,621,766
Number of Sequences: 237096
Number of extensions: 2238149
Number of successful extensions: 16289
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16289
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)