Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1k19
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            28   0.33 
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    25   3.0  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   5.3  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 YEKARLIVKEMKFEQPPNFVDFISFNATDNDNSMIID 353
           + +A+  VKE++ +  PN V  ++ N  D  NS ++D
Sbjct: 112 FARAKTWVKELQRQASPNIVIALAGNKADLANSRVVD 148


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 19/84 (22%), Positives = 40/84 (47%)
 Frame = +3

Query: 123 LEFDNDQNEEYIIFMNVKRAFYKNFHITCDLSLETLTVLVYEKARLIVKEMKFEQPPNFV 302
           ++F++     +++ +N K  +Y+    TC+  +      +  + RL   E   E PP+ +
Sbjct: 33  IDFEHYDKHYFVLPINNKDKWYR----TCNRQINQQWKRIRTE-RLKTLEHSPEMPPSLI 87

Query: 303 DFISFNATDNDNSMIIDLCSDARI 374
                 + +ND   +I LCS ++I
Sbjct: 88  ----IASGENDRVQVIALCSISKI 107


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +1

Query: 442 KNVTGYLGPQSSRTQKCETFWIV 510
           +N+ GY+G   +    C   W++
Sbjct: 203 ENILGYVGSDMTSRNSCTQLWLI 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,179
Number of Sequences: 2352
Number of extensions: 10160
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)