Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1k19
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241...    31   2.0  
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA...    31   2.0  
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    29   4.6  
DQ015970-1|AAY81927.1|  682|Drosophila melanogaster SOL-1 relate...    29   6.1  
BT023055-1|AAY55471.1|  680|Drosophila melanogaster IP10972p pro...    29   6.1  
AE014297-1502|AAN13543.1|  351|Drosophila melanogaster CG31218-P...    29   6.1  
AE014134-1755|AAF52850.1|  734|Drosophila melanogaster CG13127-P...    29   6.1  

>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
           protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 LCSDARIIVAKKLTPDETYHQRVSGFLDFQK 446
           LC+DA II  K  +PD    +R+  FLDF K
Sbjct: 255 LCNDAPIIDGKH-SPDNNVKERIDTFLDFAK 284


>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
           isoform A protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 LCSDARIIVAKKLTPDETYHQRVSGFLDFQK 446
           LC+DA II  K  +PD    +R+  FLDF K
Sbjct: 255 LCNDAPIIDGKH-SPDNNVKERIDTFLDFAK 284


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
            protein.
          Length = 2282

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 387  KLTPDETYHQRVSGFLDFQKRNWIPRPPIESDP 485
            K+  +E  H + SGF  F+K+N I R P E+ P
Sbjct: 2035 KIKINEKNHSKSSGFSCFRKKNKIHREPKENAP 2067


>DQ015970-1|AAY81927.1|  682|Drosophila melanogaster SOL-1 related
           protein protein.
          Length = 682

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 207 CDLSLETLTVLVYEKARLIVKEMKFEQPPNFVDFISFNATDN 332
           C  S E     +Y   RL+   ++F+QPP   D  S+N T N
Sbjct: 120 CQHSRERSATPIYSAGRLLGLRLRFQQPP--TDLASWNLTLN 159


>BT023055-1|AAY55471.1|  680|Drosophila melanogaster IP10972p
           protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 207 CDLSLETLTVLVYEKARLIVKEMKFEQPPNFVDFISFNATDN 332
           C  S E     +Y   RL+   ++F+QPP   D  S+N T N
Sbjct: 118 CQHSRERSATPIYSAGRLLGLRLRFQQPP--TDLASWNLTLN 157


>AE014297-1502|AAN13543.1|  351|Drosophila melanogaster CG31218-PA
           protein.
          Length = 351

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 207 CDLSLETLTVLVYEKARLIVKEMKFEQPPNFVDFISFNATDN 332
           C  S E     +Y   RL+   ++F+QPP   D  S+N T N
Sbjct: 43  CQHSRERSATPIYSAGRLLGLRLRFQQPP--TDLASWNLTLN 82


>AE014134-1755|AAF52850.1|  734|Drosophila melanogaster CG13127-PA
           protein.
          Length = 734

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 387 KLTPDETYHQR-VSGF-LDFQKRNWIPRPPIESDPKVRNVLDRE 512
           K   +E++  R + GF LD+ K   +P PP+E  P    VLD E
Sbjct: 437 KAPAEESFTNRSIGGFQLDYHKIFDVPSPPVEPLPWEEEVLDLE 480


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,275,995
Number of Sequences: 53049
Number of extensions: 462848
Number of successful extensions: 1479
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)