Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1k17
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-686|AAF47786.2|  354|Drosophila melanogaster CG10862-PA...    35   0.12 
AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA...    29   4.6  
AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p pro...    29   8.0  
AE014297-652|AAF54150.2|  124|Drosophila melanogaster CG10928-PA...    29   8.0  
AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-P...    29   8.0  

>AE014296-686|AAF47786.2|  354|Drosophila melanogaster CG10862-PA
           protein.
          Length = 354

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -3

Query: 440 VPGNNFTVYVLGLAFTSIKLPRTTPTYIKYL*VTPSSFHCNV--NGNL*MNAL-SKNRPV 270
           +PG + TVY  G     I  PR  P Y  YL     ++HCN+  +G + ++ L SK  P 
Sbjct: 244 IPGPSETVYEGGRFRVEIVFPRNYPFYPPYLAFLTKTYHCNIALSGRICLDILGSKWSPA 303

Query: 269 SSTN 258
            S +
Sbjct: 304 LSVS 307


>AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA,
           isoform A protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = +1

Query: 349 KYLIYVGVVRGNLIDVNAKPNTYTVK----LLPGTFGNDYRIMLKPRRFNCEITRS-LAI 513
           K L  +GV  G+  D   +   Y +     LL G  G D+ +  K   +N       L+ 
Sbjct: 268 KCLFNLGVKAGDSRDEQLRNRFYPIAPYGALLSGNVGMDFWLY-KYAYYNPRSCMDCLSE 326

Query: 514 VPLNKYFNYMNDKQLITYDYSNY 582
            P+   F+Y++ KQL  YDY NY
Sbjct: 327 YPVA--FHYVHSKQLYVYDYFNY 347


>AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 37  AQFFKCQICKMRNAAGLFMIIEPDKAVLLCARRAYRSANAPAADINDTFLEKISIP 204
           ++  +C+IC  R    +  +  P   V+ CA+ A R +N P   +  T + KI +P
Sbjct: 543 SEAMQCKICMDR---AINTVFNPCCHVIACAQCAARCSNCPNCRVKITSVVKIYLP 595


>AE014297-652|AAF54150.2|  124|Drosophila melanogaster CG10928-PA
           protein.
          Length = 124

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 454 SRCQTCPATTSRCTCWVWRSRQSSCR 377
           +R Q    T+S  +CW++  R SSCR
Sbjct: 90  TRSQLTANTSSSRSCWIYSIRMSSCR 115


>AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-PA
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 37  AQFFKCQICKMRNAAGLFMIIEPDKAVLLCARRAYRSANAPAADINDTFLEKISIP 204
           ++  +C+IC  R    +  +  P   V+ CA+ A R +N P   +  T + KI +P
Sbjct: 543 SEAMQCKICMDR---AINTVFNPCCHVIACAQCAARCSNCPNCRVKITSVVKIYLP 595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,842,344
Number of Sequences: 53049
Number of extensions: 599227
Number of successful extensions: 1989
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)