Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1k11
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 397 e-110
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 397 e-110
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 397 e-110
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 397 e-110
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 397 e-110
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 397 e-110
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 397 e-110
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 395 e-110
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 388 e-107
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 388 e-107
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 388 e-107
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 388 e-107
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 386 e-107
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 385 e-107
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 371 e-102
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 360 3e-99
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 357 2e-98
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 8e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.8
BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III do... 31 3.2
BC033635-1|AAH33635.1| 753|Homo sapiens FNDC3B protein protein. 31 3.2
AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein. 31 3.2
AY358146-1|AAQ88513.1| 847|Homo sapiens YVTM2421 protein. 31 3.2
AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte di... 31 3.2
AK075220-1|BAC11480.1| 760|Homo sapiens protein ( Homo sapiens ... 31 3.2
AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein. 31 3.2
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.2
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 5.5
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 5.5
AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein. 30 7.3
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 9.6
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 397 bits (977), Expect = e-110
Identities = 175/228 (76%), Positives = 204/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 395 bits (972), Expect = e-110
Identities = 174/228 (76%), Positives = 203/228 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 388 bits (955), Expect = e-107
Identities = 169/228 (74%), Positives = 202/228 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 388 bits (955), Expect = e-107
Identities = 169/228 (74%), Positives = 202/228 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 388 bits (955), Expect = e-107
Identities = 169/228 (74%), Positives = 202/228 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 388 bits (955), Expect = e-107
Identities = 169/228 (74%), Positives = 202/228 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 386 bits (950), Expect = e-107
Identities = 168/227 (74%), Positives = 201/227 (88%)
Frame = +2
Query: 44 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 223
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 224 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 403
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 404 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 583
KLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 584 MITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
M+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 385 bits (948), Expect = e-107
Identities = 168/228 (73%), Positives = 201/228 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ GG NLGRVG I +RERHPGSF +VH+KD+ G++FATRL+N+F+I
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVI 228
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 371 bits (912), Expect = e-102
Identities = 161/228 (70%), Positives = 196/228 (85%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 401 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 580
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 581 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
CM+ G NLGRVG I +RERHPGS D+VH+KD+ G++FATR++N+F+I
Sbjct: 181 CMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVI 228
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 360 bits (885), Expect = 3e-99
Identities = 158/208 (75%), Positives = 186/208 (89%)
Frame = +2
Query: 101 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 280
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 460
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 461 THDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRER 640
THD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 641 HPGSFDIVHIKDSTGHTFATRLNNVFII 724
HPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 181 HPGSFDVVHVKDANGNSFATRLSNIFVI 208
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 357 bits (878), Expect = 2e-98
Identities = 159/210 (75%), Positives = 187/210 (89%)
Frame = +2
Query: 95 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 274
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 275 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 454
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 455 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 634
LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 635 ERHPGSFDIVHIKDSTGHTFATRLNNVFII 724
ERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 180 ERHPGSFDVVHVKDANGNSFATRLSNIFVI 209
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 8e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 208
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 427
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III
domain containing 3B protein.
Length = 1204
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>BC033635-1|AAH33635.1| 753|Homo sapiens FNDC3B protein protein.
Length = 753
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 98 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 138
>AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein.
Length = 625
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 545 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 585
>AY358146-1|AAQ88513.1| 847|Homo sapiens YVTM2421 protein.
Length = 847
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 192 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 232
>AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte
differentiation 104 variant protein.
Length = 1204
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>AK075220-1|BAC11480.1| 760|Homo sapiens protein ( Homo sapiens
cDNA FLJ90739 fis, clone PLACE1010968, highly similar to
FAD104. ).
Length = 760
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 105 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 145
>AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein.
Length = 1204
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 714 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 574
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 427
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 122 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 289
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 290 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 382
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 122 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 289
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 290 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 382
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 603 TWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 695
TWG+ P C A LCT P+D P+
Sbjct: 387 TWGLCMPPCGPNPTRARQRLCTPLLPKDPPT 417
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 272 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 436
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,368,183
Number of Sequences: 237096
Number of extensions: 2749916
Number of successful extensions: 16397
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 15935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16386
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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