Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1j14
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro...    31   1.3  
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P...    31   1.3  
AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p pro...    30   3.1  
BT030441-1|ABO52861.1|  759|Drosophila melanogaster RE42355p pro...    29   7.1  
AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-relate...    29   7.1  
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,...    29   7.1  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    28   9.4  

>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p protein.
          Length = 1312

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 531  SNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 370
            +N       +NI   V+L     LE   L  R P P+ EI    EH   P  +T
Sbjct: 959  NNNNNNNNNININNSVRLESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 1012


>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
            protein.
          Length = 1311

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 531  SNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 370
            +N       +NI   V+L     LE   L  R P P+ EI    EH   P  +T
Sbjct: 958  NNNNNNNNNININNSVRLESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 1011


>AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p
           protein.
          Length = 68

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 601 IFIYFMLILYFMCLKSYIK 545
           I+I+FM  LY +CL  Y+K
Sbjct: 8   IYIFFMFFLYILCLSLYVK 26


>BT030441-1|ABO52861.1|  759|Drosophila melanogaster RE42355p
           protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 534 KSNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPP 430
           + NRPKI  + N  +++K  P+ K E       PP
Sbjct: 181 QKNRPKISVRFNTVSQIKYTPSAKRERQAREEEPP 215


>AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-related
           protein protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 531 SNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 370
           +N       +NI   V+      LE   L  R P P+ EI    EH   P  +T
Sbjct: 376 NNNNNNNNNININNSVRRESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 429


>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
            isoform C protein.
          Length = 2347

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 534  KSNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPP 430
            + NRPKI  + N  +++K  P+ K E       PP
Sbjct: 1769 QKNRPKISVRFNTVSQIKYTPSAKRERQAREEEPP 1803


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -1

Query: 487 SKTQARN*TRNHP-PF*PSPVPTEGDLFFF*TLVIPRKTNNKHKKSVACVEQIVMF*NAS 311
           S+TQA+N T+NHP P   SP  T+ +       ++ R T ++ + ++  +++ +    AS
Sbjct: 586 SQTQAQNQTQNHPNPAKKSPAVTKPNYRALINDMLKRNTASEQELNLQIIKKTLNMEPAS 645

Query: 310 LKN 302
            +N
Sbjct: 646 SRN 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,487,045
Number of Sequences: 53049
Number of extensions: 576157
Number of successful extensions: 1337
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)