Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1i10
(734 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 27 0.14
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.0
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 3.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.9
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.1
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.5 bits (58), Expect = 0.14
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 691 NNKT*YFIHVSNNFNRYQTLKYYYYI 614
+NKT IH +NN+N Y K YY I
Sbjct: 308 SNKT---IHNNNNYNNYNNKKLYYNI 330
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 715 SIHKNIFFNNKT*YFIHVSNNFNRYQTLKYY 623
S+ N ++N Y + +NN+N Y YY
Sbjct: 317 SLSNNYKYSNYNNYNNYNNNNYNNYNKKLYY 347
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 715 SIHKNIFFNNKT*Y-FIHVSNNFNRYQTLKY 626
+IH N +NN + + +NN+N Y+ L Y
Sbjct: 89 TIHNNNNYNNNNYNNYNYNNNNYNNYKKLYY 119
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -2
Query: 715 SIHKNIFFNN---KT*YFIHVSNNFNRYQTLKY 626
+IH N +NN Y + +NN+N Y+ L Y
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYY 354
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 71 ILYISTIDTNHIYGFNFTNLTFVIVLSSYLANVSEIYES 187
+L +S IYGF+F ++ F I+ +ANV+++ ++
Sbjct: 376 VLAVSNRIQKVIYGFDFNDVNFRIL----IANVNDLIKN 410
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 505 ILKISFYYFTILKQTKNDNIKHKNPPIRLAQRSKID 398
+L+ + + +DNI+ K PP Q + +D
Sbjct: 319 LLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMD 354
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 505 ILKISFYYFTILKQTKNDNIKHKNPPIRLAQRSKID 398
+L+ + + +DNI+ K PP Q + +D
Sbjct: 319 LLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMD 354
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 691 NNKT*YFIHVSNNFNRYQTLKYYYYI 614
+NKT IH +NN+ Y YY I
Sbjct: 319 SNKT---IHNNNNYKNYNKKLYYNII 341
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 664 VSNNFNRYQTLKYY 623
+ NN N Y+ L+YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 664 VSNNFNRYQTLKYY 623
+ NN N Y+ L+YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 664 VSNNFNRYQTLKYY 623
+ NN N Y+ L+YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 664 VSNNFNRYQTLKYY 623
+ NN N Y+ L+YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 664 VSNNFNRYQTLKYY 623
+ NN N Y+ L+YY
Sbjct: 323 IHNNNNNYKKLQYY 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,784
Number of Sequences: 438
Number of extensions: 4014
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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