BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1i08
(728 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 29 0.19
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 5.5
AY146722-1|AAO12082.1| 107|Anopheles gambiae odorant-binding pr... 23 7.3
AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding pr... 23 7.3
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 23 9.7
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 23 9.7
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 23 9.7
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 28.7 bits (61), Expect = 0.19
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 587 LGLPGSQILAKFYEASKKINAALNAVLEDSAAKEIGIEDKAASGA 721
+G+PGS +A+FY+ + ++AA V DS + GA
Sbjct: 44 MGVPGSASIAQFYQQAAAVSAASAGVGVDSLGSACSQLSSSVGGA 88
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 634 EEDQRGSERGSRRFCRERDRNRGQGGLGRGA 726
EED GS+R SR R +R + G G+
Sbjct: 1055 EEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS 1085
>AY146722-1|AAO12082.1| 107|Anopheles gambiae odorant-binding
protein AgamOBP16 protein.
Length = 107
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 17 APRSKPPTLLKRLTEVRPENLDYLGTS 97
AP+S P LL+++ + R E L GT+
Sbjct: 20 APKSLSPELLQQMGQFRSECLRETGTT 46
>AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding
protein AgamOBP15 protein.
Length = 147
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 17 APRSKPPTLLKRLTEVRPENLDYLGTS 97
AP+S P LL+++ + R E L GT+
Sbjct: 20 APKSLSPELLQQMGQFRSECLRETGTT 46
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 323 TLVTDSVKVNKPVLTKDLIEQYLTGHDLSRLEAYSKQQA 439
T+ D+V+++ P + ++Q RLE SKQ+A
Sbjct: 92 TVCWDTVELDVPRAERATLKQQYEEQHRKRLEQQSKQRA 130
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 323 TLVTDSVKVNKPVLTKDLIEQYLTGHDLSRLEAYSKQQA 439
T+ D+V+++ P + ++Q RLE SKQ+A
Sbjct: 92 TVCWDTVELDVPRAERATLKQQYEEQHRKRLEQQSKQRA 130
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 23.0 bits (47), Expect = 9.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 406 VQARGLLQATGRLQAHHGPAAAAGRT 483
VQ L Q GRL H G A+ G +
Sbjct: 197 VQIAALKQRLGRLGRHSGTMASTGHS 222
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,489
Number of Sequences: 2352
Number of extensions: 10044
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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