Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1h10
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical ... 31 0.61
U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 30 1.4
AC084159-21|AAK39355.2| 95|Caenorhabditis elegans Hypothetical... 29 4.3
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 28 5.7
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 5.7
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 5.7
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 9.9
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 9.9
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 9.9
U29381-10|AAA68748.1| 136|Caenorhabditis elegans Hypothetical p... 27 9.9
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 9.9
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 9.9
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 9.9
AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical
protein F23H11.2 protein.
Length = 865
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 206 KAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRH 54
K I L T LT Q N QCAL D ++ D ++W H ++ +K + H
Sbjct: 481 KLIAYLLLTLRLTFQLDNA---QCALQDDQYFDVDSWIHQLEMRIKCWQGH 528
>U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical
protein C05D9.7 protein.
Length = 249
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/98 (25%), Positives = 42/98 (42%)
Frame = -3
Query: 455 VYYIKCSDNFVINAFNANIYKRYITVFASVILYNIMNTRGCVNNNKMIFMNALGLQPQSK 276
+ +I C+ ++ AFNA +Y Y + ILY G V + M+ + + QP
Sbjct: 73 ISFIYCALAIIVIAFNAFMY--YNGIRNKFILYVSAVMGGIVLTSLMMHIGIIRQQPFFC 130
Query: 275 VKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQ 162
+ + +TLE F + IK E + + LQ
Sbjct: 131 IPFVVLRTLETFVSAVFLTAFTYALIKPESELFMFFLQ 168
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/111 (18%), Positives = 47/111 (42%)
Frame = -3
Query: 389 YITVFASVILYNIMNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKG 210
Y+ A+ + ++ T GC ++ IF + K + + K KRD T +
Sbjct: 12 YLCFVATATITSVAITLGCTAGHREIFRRRSSSNSKKSKKSMKSRKSMKSKRDRRTSERE 71
Query: 209 VKAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKR 57
K+ ++ K +++ + ++ + D + ++N D ++ V+ R
Sbjct: 72 RKSSRDRNKVSRRSMKSSRDRKSRRSSKDRKSHRSSNRKRDREDDVRDGSR 122
>AC084159-21|AAK39355.2| 95|Caenorhabditis elegans Hypothetical
protein Y73B3A.10 protein.
Length = 95
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 203 AIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNN--WHHDIKEGVKINKRHIYRVNFNS 30
AI+ +K L L++ E ++ + +RW T+ W H + VK+ + H R NF +
Sbjct: 20 AIETLVKLKLLKLRRSRE-MSLLKVRRNRWTRTSEEGWKHKVASNVKMIENHRLRHNFQT 78
Query: 29 KTKE 18
K+
Sbjct: 79 YMKK 82
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -3
Query: 200 IKNELKTYNLTLQQYNEALNQCALN-DSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKT 24
I +++ T +Q NE + D W H + VK+ + H R NF +
Sbjct: 33 ISGKIEIVEATTEQRNELAESAKKSMDKNMASEEGWKHMVASNVKMIENHRLRHNFQTYM 92
Query: 23 KE 18
K+
Sbjct: 93 KK 94
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -3
Query: 200 IKNELKTYNLTLQQYNEALNQCALN-DSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKT 24
I +++ T +Q NE + D W H + VK+ + H R NF +
Sbjct: 33 ISGKIEIVEATTEQRNELAESAKKSMDKNMASEEGWKHMVASNVKMIENHRLRHNFQTYM 92
Query: 23 KE 18
K+
Sbjct: 93 KK 94
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 293 LQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNE 150
L+ ++ VK+ + + +A+ + K +K + NELK L+ E
Sbjct: 478 LEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAELKDLEE 525
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 293 LQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNE 150
L+ ++ VK+ + + +A+ + K +K + NELK L+ E
Sbjct: 480 LEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAELKDLEE 527
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 31 ELKLTLYICLLFIFTPSLIS*CQLFVSRHRLSFK 132
E+ L C+LF+F ++S LFVSR FK
Sbjct: 5 EINQFLIYCILFLFMMLIVSIILLFVSRPIYKFK 38
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 1086 LNDSRWPDKRVWHGSKDGGIR 1106
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical protein
C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 1049 LNDSRWPDKRVWHGSKDGGIR 1069
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 561 LNDSRWPDKRVWHGSKDGGIR 581
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 1086 LNDSRWPDKRVWHGSKDGGIR 1106
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 1049 LNDSRWPDKRVWHGSKDGGIR 1069
>U29381-10|AAA68748.1| 136|Caenorhabditis elegans Hypothetical
protein F35D11.1 protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 514 TICNC*KHNYCLIMHTNIKRFII*SAVITLL 422
T C C NYC H+ + F + S ++T+L
Sbjct: 105 TYCFCNSSNYCNTGHSTFQTFKLFSLILTML 135
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 561 LNDSRWPDKRVWHGSKDGGIR 581
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 131 LNDSRWRDTNNWHHDIKEGVK 69
LNDSRW D WH G++
Sbjct: 1028 LNDSRWPDKRVWHGSKDGGIR 1048
>AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical
protein T08B1.1 protein.
Length = 591
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 387 IAFIYVGIKRVDNKVITALYIINRLIFVCIIKQ*LCFQQLQIV*TRSNYPLIVKCSGF 560
IA + G D+K + L I+ +I CI +QI T YP +++C F
Sbjct: 410 IALVATGTCTYDSKAVNILVIVTTMINDCI----FWINIVQI--TTQRYPTVIRCVAF 461
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,620
Number of Sequences: 27780
Number of extensions: 273083
Number of successful extensions: 748
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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