Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1h08
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.72 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    26   1.3  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.2  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.9  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   3.8  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       24   3.8  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   3.8  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   5.1  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 14/73 (19%), Positives = 35/73 (47%)
 Frame = +2

Query: 140 ERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYKRTNA 319
           +++ Q + QQ      +  R    EW +   +++QQ+     Q ++R  ++  +++R   
Sbjct: 235 QQQQQQQQQQQQQQQQQQQRNQQREWQQ--QQQQQQHQQREQQQQQRVQQQNQQHQRQQQ 292

Query: 320 YKEFTKQQSDLQD 358
            ++  +QQ   Q+
Sbjct: 293 QQQQQRQQQQQQE 305


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
 Frame = +2

Query: 191 LTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYKRTNAY--KEFTKQQSDLQDGS 364
           L ++L ++ S +  ++ ++  + A +DKE+ ++   EY+R  A   +E TK  + L    
Sbjct: 69  LLQELQAQIS-IMMKKSRETKEEARRDKEKAIRHREEYRRDMALIREENTKLLAQLMAMK 127

Query: 365 -LSKKLRQVPQVDAS--VSGGTQPGESTMYSASTTNMSSRQTTPPKPRPCINPTSGEMEI 535
            ++     +P    S       QP  +++ +   T  +S + T  + +    P S  +E 
Sbjct: 128 VVTTTAGSIPSASLSQRQQSSPQPSMASVVANGDTASTSHRVTLTQSQYRRAPISNFVES 187

Query: 536 PIFTDQFLQHNKLRESELRQLRKANSDYEQ 625
                + +   K R S+ R+  + ++ Y+Q
Sbjct: 188 DGIWRE-VTRRKSRRSDNRRNERESTQYQQ 216


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 288 KNVRNTKEQMLIKSSQNNNLI 350
           +NVRNTK  +++K    N+LI
Sbjct: 85  RNVRNTKHALMLKCLLTNDLI 105


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 158  RAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKER 280
            RA  P+L   ++    A+ + +LP  + QQ   A+D  K++
Sbjct: 1159 RANMPELNMKQILDYKAAYFGKLPKHQHQQ--QASDDQKKK 1197



 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 359 GSLSKKLRQVPQVDASVSGGTQPGESTMYSASTTNMSSRQTTPPKP 496
           GS  +K +    + + ++  T P  S + SAS+ N+SS  +T   P
Sbjct: 176 GSARRKTKPNSPLGSLLAAVTSPVLSRISSASSPNLSSNGSTLSSP 221


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 242  QQYLDAADQDKERYVKECAEYKRTNAYKEFTKQQSDLQDGS 364
            Q+YL   D  ++R+   CA Y  +NA      Q +D    S
Sbjct: 933  QEYLKTYDFVRDRHKIRCASYVSSNATVVPATQPADASQAS 973


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +2

Query: 230 AEEKQQYLDAADQDKERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSK 373
           A+E++  LD A      +V++CA+       ++  +Q+  + DG  +K
Sbjct: 324 ADERKTELDEAKVMLAAFVQDCADSATALGSEDQVRQEISVLDGKEAK 371


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
 Frame = +2

Query: 329 FTKQQSDLQDGS-LSKKLRQVPQVDASVSGGTQPGESTMYSASTTNMSSRQTTPPKPRPC 505
           F  +Q D Q  S ++ + R   +  A+    T+   +T    +T  +++R +TPP P   
Sbjct: 286 FQSRQHDHQTSSPIATRNRFTTRTPAT---STEHRYTTRTPTTTHRLAARTSTPPDP--- 339

Query: 506 INPTSGEMEIPIFTDQFLQHNKLRESELRQLRKANSDYEQQNAI 637
              TS +   P   D     N    S   Q  +A+S +  Q+ I
Sbjct: 340 -ETTSSQQCHPPVNDTLEAPNSTLVSGPPQNHRASSPHLHQSTI 382


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 423 WVPPETEAST*GTCRNFFDKLPSCRSDCCFVNSL 322
           W+      +T G+C+ F     + + D CF+N +
Sbjct: 3   WILLVVALATHGSCQRFKGSTFTTKDDYCFLNGI 36


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 239 FLQLEVYSTR*LTVWSILQNPN 174
           F  +E Y T   T++  +QNPN
Sbjct: 359 FASVETYGTSLATIFPAMQNPN 380


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 483 PHQNQDHVLILHLVKWKY 536
           PH  + H  I+HL +WK+
Sbjct: 26  PHFVRGHSTIVHLFEWKW 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,028
Number of Sequences: 2352
Number of extensions: 13415
Number of successful extensions: 58
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)