Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1h05
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 120 2e-28
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 79 4e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 4e-10
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 45 8e-06
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 1e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 5e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 39 7e-04
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.004
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.6
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 1.6
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 2.9
SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces po... 26 5.0
SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein |Sch... 25 6.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 6.6
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 6.6
SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces pombe... 25 8.8
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 25 8.8
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 25 8.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 120 bits (288), Expect = 2e-28
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
Frame = +3
Query: 162 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPP 341
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDG-- 72
Query: 342 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 521
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 522 KELLTVADFEAFTSK-DEVVVVGFFEKE 602
K ++ E F K D++ VV FF+ +
Sbjct: 132 KP-ISKDTLENFVEKADDLAVVAFFKDQ 158
Score = 69.3 bits (162), Expect = 4e-13
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Frame = +3
Query: 177 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALA 353
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A +DD V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEY-SDDSNVVVA 411
Query: 354 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 521
K+D TE S S+SG+PT+ F+ + + Y G R + ++ A P
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467
Query: 522 KE 527
KE
Sbjct: 468 KE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 79.4 bits (187), Expect = 4e-16
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 99 KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 278
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 279 CKRLKPEYAVAAGLLKTDDPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 443
CK+L P Y A L + P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 444 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 536
S++YNG R + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 59.3 bits (137), Expect = 4e-10
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 186 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVD 362
+V++L +F V+ LV FYA WCG+CKRL P Y + K ++P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFK-NEPNVEIVKIN 199
Query: 363 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVG 512
+ V+ +PT+K F K + Y G R +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 58.8 bits (136), Expect = 6e-10
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 243 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 422
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 423 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 533
F G +Y+ R+ + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 45.2 bits (102), Expect = 8e-06
Identities = 31/118 (26%), Positives = 55/118 (46%)
Frame = +3
Query: 243 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 422
A VMF + HC+ AV + + + D + +A+V+C E K C F + +PT
Sbjct: 199 AFVMFVS--LKHCEDCFHWEAVWSSITRNTDERLKMAQVNCDE-EKEMCNHFHIKKFPTF 255
Query: 423 KIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFE 596
++F +G S +YNGP + ++ Y QV + D E+ + V + ++
Sbjct: 256 RVF-QGFDSIQYNGPLKYQQLLSYSN-QVASYQAIKIEEGDIESIENSHPVFFLVLYD 311
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +3
Query: 198 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP--EYAVAAGLLKTDDPPVALAKVDCTE 371
LTD+D + +S+ T + +Y P CG CKRL P + V + + +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 372 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVAD 545
S+C ++ PTL +++ GE+ E + ++ ++ + P + + +D
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145
Query: 546 FEAFTSKD 569
+ T +D
Sbjct: 146 EDVLTDED 153
Score = 40.7 bits (91), Expect = 2e-04
Identities = 30/134 (22%), Positives = 58/134 (43%)
Frame = +3
Query: 204 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKS 383
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGK---LNVAHINCAVS-KR 343
Query: 384 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTS 563
C+Q+S+ +PT +F K E EY G +V + +E+ + A +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELLDTVNAEKN 402
Query: 564 KDEVVVVGFFEKES 605
D V + F++ +S
Sbjct: 403 GD-VFFLYFYDDDS 415
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 207 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKST 386
S+F +++ Q +V F+A WCG CK + P++ + KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYS----DATFIKVDVDQLSEIA 64
Query: 387 CEQFSVSGYPTLKIFRKGELSSEYNG 464
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 38.7 bits (86), Expect = 7e-04
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 210 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTC 389
D++ +S +V FYA WCG CK LKP L + + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 390 EQFSVSGYPTLKIFRKGE 443
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 258 YAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 437
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 438 GE 443
G+
Sbjct: 84 GK 85
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.6
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -2
Query: 613 FRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLG-PLYSEESSP 437
F S F+ TSS +S S+ V +S + +P S PL + +P
Sbjct: 651 FTSSGFNTTSGLPTSSASTPSSNSSIVPTSTFTSSGF-NTTSGLPTSSASTPLSNSTVAP 709
Query: 436 FLKIFSVGYPDTENCSQVLLPPSVQSTLASATGGSSVFNRPAATAYS 296
S G+ T + + ++ A + GSS F+R ++T S
Sbjct: 710 TSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTS 756
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +3
Query: 246 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 425
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 426 IFRKGELSSEYNG 464
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 190 FSILQIPTFRLFYLNMIQPWSCF 258
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -2
Query: 601 SFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEESSPFLKIF 422
+++ T T SL + + +E PT+ LD+ GPLY + + K++
Sbjct: 235 TYNTGTTMTAMSLLMGLGEFTKGLQDIEKLPTYLEDMARGALDTNGPLYDQSCNGSFKVW 294
Query: 421 S 419
S
Sbjct: 295 S 295
>SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -2
Query: 139 NFSDPNISNLAGAFQQNRTNYSAFQPNLTNESIKERTRTGKLKI 8
+F+ P ++ A AF N + PN NE+ E +G ++
Sbjct: 2 DFALPTTASQASAFMNNSSLTFPVLPNANNEATNETADSGDAEV 45
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 511 PTWARMYLTMPLDSLGPLYSEESSPFLKIFS 419
P ++Y+T+ D +G E +SP +K+ S
Sbjct: 1414 PQKEKLYITISADEVGKFILEATSPTVKVSS 1444
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 6.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 180 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKT 329
EE V+D+ + D +AVL L + +P+ CK P+ V A +L+T
Sbjct: 324 EEAVIDVDELDKNAVLFGGTRVLQVTQSPF---CKLKTPDNGVPAIVLRT 370
>SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.0 bits (52), Expect = 8.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 130 DPNISNLAGAFQQNRTNYSAF--QPNLTNESIKERTRTGKL 14
DP+ + ++GA Q + T+ F P LTN+ I E +R G +
Sbjct: 156 DPSFT-MSGAPQDSNTSVIVFGFPPELTNQVIAEFSRFGTI 195
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 156 IIYLCKAAEEDVLDLTDSDFSAVLSQHD 239
+IY C+AA+E++LD LS+ D
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRD 33
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 324 KTDDPPVALAKVDCTEGGK 380
KTDD PV AK D T G+
Sbjct: 501 KTDDSPVTDAKPDVTSNGE 519
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,552,876
Number of Sequences: 5004
Number of extensions: 51857
Number of successful extensions: 159
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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