Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1g22
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b ...    65   1e-10
D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.               65   1e-10
BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome, ma...    65   1e-10
AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome, ma...    65   1e-10
AL161911-6|CAI95117.1|  157|Homo sapiens proteasome (prosome, ma...    43   7e-04

>S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b
           protein.
          Length = 504

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 71/141 (50%)
 Frame = +3

Query: 78  GSLRGN*AAKEIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSLVASGG 257
           G+L    + ++I E+YPI    +F + ES    ++ VA+DT G +GS  EGK  L  +G 
Sbjct: 278 GNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGT 337

Query: 258 KFTETMMKVNLLIXNXSSDIKIRALNCLTNLISIEKDTNTANSKPVDHRVTLITREXXRG 437
           +F   +M++     N   ++KIR L+ +++L+ +  +  T +       +  +T      
Sbjct: 338 RFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQQTDD-------LLRMTESWFSS 390

Query: 438 LSEQPSSMDLLFDICKNPFPD 500
           LS  P  ++L   I   PFP+
Sbjct: 391 LSRDP--LELFRGISSQPFPE 409


>D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.
          Length = 503

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 71/141 (50%)
 Frame = +3

Query: 78  GSLRGN*AAKEIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSLVASGG 257
           G+L    + ++I E+YPI    +F + ES    ++ VA+DT G +GS  EGK  L  +G 
Sbjct: 277 GNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGT 336

Query: 258 KFTETMMKVNLLIXNXSSDIKIRALNCLTNLISIEKDTNTANSKPVDHRVTLITREXXRG 437
           +F   +M++     N   ++KIR L+ +++L+ +  +  T +       +  +T      
Sbjct: 337 RFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQQTDD-------LLRMTESWFSS 389

Query: 438 LSEQPSSMDLLFDICKNPFPD 500
           LS  P  ++L   I   PFP+
Sbjct: 390 LSRDP--LELFRGISSQPFPE 408


>BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 71/141 (50%)
 Frame = +3

Query: 78  GSLRGN*AAKEIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSLVASGG 257
           G+L    + ++I E+YPI    +F + ES    ++ VA+DT G +GS  EGK  L  +G 
Sbjct: 278 GNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGT 337

Query: 258 KFTETMMKVNLLIXNXSSDIKIRALNCLTNLISIEKDTNTANSKPVDHRVTLITREXXRG 437
           +F   +M++     N   ++KIR L+ +++L+ +  +  T +       +  +T      
Sbjct: 338 RFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQQTDD-------LLRMTESWFSS 390

Query: 438 LSEQPSSMDLLFDICKNPFPD 500
           LS  P  ++L   I   PFP+
Sbjct: 391 LSRDP--LELFRGISSQPFPE 409


>AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 71/141 (50%)
 Frame = +3

Query: 78  GSLRGN*AAKEIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSLVASGG 257
           G+L    + ++I E+YPI    +F + ES    ++ VA+DT G +GS  EGK  L  +G 
Sbjct: 278 GNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGT 337

Query: 258 KFTETMMKVNLLIXNXSSDIKIRALNCLTNLISIEKDTNTANSKPVDHRVTLITREXXRG 437
           +F   +M++     N   ++KIR L+ +++L+ +  +  T +       +  +T      
Sbjct: 338 RFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQQTDD-------LLRMTESWFSS 390

Query: 438 LSEQPSSMDLLFDICKNPFPD 500
           LS  P  ++L   I   PFP+
Sbjct: 391 LSRDP--LELFRGISSQPFPE 409


>AL161911-6|CAI95117.1|  157|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 157

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = +3

Query: 78  GSLRGN*AAKEIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSLVASG 254
           G+L    + ++I E+YPI    +F + ES    ++ VA+DT G +GS  EGK  L  +G
Sbjct: 49  GNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTG 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,397,449
Number of Sequences: 237096
Number of extensions: 936182
Number of successful extensions: 1479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)