Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1g22
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069698-1|AAL39843.1|  479|Drosophila melanogaster LD46817p pro...    41   0.001
AE014298-1856|AAF48236.3|  506|Drosophila melanogaster CG12096-P...    41   0.001

>AY069698-1|AAL39843.1|  479|Drosophila melanogaster LD46817p
           protein.
          Length = 479

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +3

Query: 108 EIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSL-VASGGKFTETMMKV 284
           +II  YP +   LF   +S  +++LP A+DT   + +T +GK+ L +   G   ++  K 
Sbjct: 264 KIIGGYPHMLACLFMQLQSEDESILPTAMDTLANLATTPQGKILLNMHFSGAMEKSFKKY 323

Query: 285 NLLIXNXSSDIKIRALNCL 341
                  S+ IK R LN L
Sbjct: 324 GSHTKKLSAHIKKRLLNSL 342


>AE014298-1856|AAF48236.3|  506|Drosophila melanogaster CG12096-PA
           protein.
          Length = 506

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +3

Query: 108 EIIEKYPILXNFLFGLFESGKQAVLPVALDTFGXVGSTTEGKLSL-VASGGKFTETMMKV 284
           +II  YP +   LF   +S  +++LP A+DT   + +T +GK+ L +   G   ++  K 
Sbjct: 291 KIIGGYPHMLACLFMQLQSEDESILPTAMDTLANLATTPQGKILLNMHFSGAMEKSFKKY 350

Query: 285 NLLIXNXSSDIKIRALNCL 341
                  S+ IK R LN L
Sbjct: 351 GSHTKKLSAHIKKRLLNSL 369


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,984,029
Number of Sequences: 53049
Number of extensions: 305592
Number of successful extensions: 590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)