Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1g20
(308 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 29 1.5
AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p pro... 29 1.5
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 29 1.5
AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-P... 29 1.5
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217... 28 2.0
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ... 28 2.0
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 27 3.6
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 27 3.6
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 27 3.6
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 27 3.6
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 27 3.6
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA... 27 3.6
AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p pro... 27 6.2
AE014297-2380|AAF55445.1| 210|Drosophila melanogaster CG14323-P... 27 6.2
AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,... 27 6.2
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPG---S 31
G PPG +L++ PP + GGS P T S H P TS P ++ PG S
Sbjct: 157 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAG-PPSLQHGLHPGHQHS 214
Query: 30 RITGGAKLP 4
+++ + +P
Sbjct: 215 QLSAASSIP 223
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 339 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 366
>AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGG 136
G+PPGP P PPN+FGG
Sbjct: 132 GYPPGPAGPG----GPPNAFGG 149
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPG---S 31
G PPG +L++ PP + GGS P T S H P TS P ++ PG S
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAG-PPSLQHGLHPGHQHS 1046
Query: 30 RITGGAKLP 4
+++ + +P
Sbjct: 1047 QLSAASSIP 1055
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-PA,
isoform A protein.
Length = 416
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGG 136
G+PPGP P PPN+FGG
Sbjct: 132 GYPPGPAGPG----GPPNAFGG 149
>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
protein.
Length = 1189
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 141 GGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPGSRITGGAKL 7
GG T + +TS+ PL S+ QTI+ P + I GG L
Sbjct: 783 GGIKETTLITQTSATPAPLQQSQLNSQTIITQSPTSTAIVGGVAL 827
>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
protein.
Length = 1688
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 141 GGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPGSRITGGAKL 7
GG T + +TS+ PL S+ QTI+ P + I GG L
Sbjct: 1282 GGIKETTLITQTSATPAPLQQSQLNSQTIITQSPTSTAIVGGVAL 1326
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*P 64
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*P 64
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*P 64
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*P 64
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*P 64
G PPG +L++ PP + GGS P T S H P TS P
Sbjct: 989 GLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPT-SLHQPTPTSAGPP 1033
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 TKEGRTGPGGKPSSQKSPHRAVVG*RPGV 253
T G +GPGG P Q+SPH PG+
Sbjct: 1171 TMAGSSGPGG-PPPQQSPHAHRTSPLPGL 1198
>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
protein.
Length = 1118
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -3
Query: 204 LGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPGS 31
+G PPG +P V ++PP++ + P T S H P S P T L PPGS
Sbjct: 624 IGHPPGSQKPPNVGIYPPST---GWIPPSGPLTQSGHPPGSLLP--PNTGL---PPGS 673
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = -3
Query: 201 GFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGP----LSTSRS*PQTILRTRPPG 34
G PPG +P V ++PP++ + P T H P S S P +I RPP
Sbjct: 892 GHPPGSQKPPNVGIYPPST---GWIPPSGPLTQGGHPPGSQVPSNSVLPPGSIPPLRPPN 948
Query: 33 -SRITGGAKLP 4
R G+++P
Sbjct: 949 QGRHPPGSQVP 959
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = -3
Query: 204 LGFPPGPVRPSLVNLHPPNSFGGSILTPGLVRTSSQHGPLSTSRS*PQTILRTRPPGS 31
+G PPG +P ++PP++ GSI G + T H P S P T L PPGS
Sbjct: 978 IGHPPGSQKPPNSGIYPPST--GSIPPSGPL-TQGGHPPGSLLP--PNTGL---PPGS 1027
>AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p
protein.
Length = 479
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 GC-RLTKEGRTGPGGKPSSQKSPHRAVVG*RPGVDAQ*QPNQ 277
GC + + TGP G +K R V+ P DA+ QPN+
Sbjct: 96 GCIKKLRTESTGPDGHKKRKKRIRRTVMRRVPPTDAEMQPNR 137
>AE014297-2380|AAF55445.1| 210|Drosophila melanogaster CG14323-PA
protein.
Length = 210
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 119 PGVNMDPPKEFGGCRLTKEGRTGPGGKPSSQKSP 220
P M PP G + + G +GPG P + P
Sbjct: 154 PPPGMPPPTSVGTVQASAGGYSGPGAGPGQRPGP 187
>AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,
isoform A protein.
Length = 453
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 GC-RLTKEGRTGPGGKPSSQKSPHRAVVG*RPGVDAQ*QPNQ 277
GC + + TGP G +K R V+ P DA+ QPN+
Sbjct: 70 GCIKKLRTESTGPDGHKKRKKRIRRTVMRRVPPTDAEMQPNR 111
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,217
Number of Sequences: 53049
Number of extensions: 426653
Number of successful extensions: 1459
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -