Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc1g09
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein. 253 4e-67
BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2... 253 4e-67
BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2... 253 4e-67
AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein. 253 4e-67
DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2... 252 7e-67
AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein. 251 2e-66
Z98745-1|CAB11428.2| 604|Homo sapiens dJ29K1.2 (KIAA0426 (C2H2 ... 31 4.2
BC041661-1|AAH41661.1| 604|Homo sapiens zinc finger and SCAN do... 31 4.2
AB007886-1|BAA24856.2| 613|Homo sapiens KIAA0426 protein. 31 4.2
>CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein.
Length = 178
Score = 253 bits (620), Expect = 4e-67
Identities = 110/177 (62%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YLQQLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 253 bits (620), Expect = 4e-67
Identities = 110/177 (62%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YLQQLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 253 bits (620), Expect = 4e-67
Identities = 110/177 (62%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YLQQLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 253 bits (620), Expect = 4e-67
Identities = 110/177 (62%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YLQQLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2/3
complex protein.
Length = 178
Score = 252 bits (618), Expect = 7e-67
Identities = 109/177 (61%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY + I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTMGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YLQQLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 251 bits (614), Expect = 2e-66
Identities = 109/177 (61%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Frame = +1
Query: 181 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 357
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 358 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEPGFPLNSVYAR 537
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEPGFPLN++YA+
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAK 119
Query: 538 PTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSFVWP 708
P ++QE ++MR YL QLR ETG R+CEKVF ++ KPSKWW CF +R+FM+KS P
Sbjct: 120 PANKQEDEVMRAYLPQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLSGP 176
>Z98745-1|CAB11428.2| 604|Homo sapiens dJ29K1.2 (KIAA0426 (C2H2
type zinc finger protein)) protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 439 SKNQGQQEMYMLAISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHETG 603
S + G+QEM++ + GEP L S+ A+P + +L Q Q L ETG
Sbjct: 136 SVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQP-KYESPELESQQEQVLDVETG 189
>BC041661-1|AAH41661.1| 604|Homo sapiens zinc finger and SCAN
domain containing 12 protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 439 SKNQGQQEMYMLAISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHETG 603
S + G+QEM++ + GEP L S+ A+P + +L Q Q L ETG
Sbjct: 136 SVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQP-KYESPELESQQEQVLDVETG 189
>AB007886-1|BAA24856.2| 613|Homo sapiens KIAA0426 protein.
Length = 613
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 439 SKNQGQQEMYMLAISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHETG 603
S + G+QEM++ + GEP L S+ A+P + +L Q Q L ETG
Sbjct: 145 SVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQP-KYESPELESQQEQVLDVETG 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,006,010
Number of Sequences: 237096
Number of extensions: 1974955
Number of successful extensions: 5089
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5077
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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