Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1g03
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...   262   2e-70
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...   260   8e-70
BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p pro...    28   8.9  
AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p pro...    28   8.9  
AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2 pr...    28   8.9  
AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin co...    28   8.9  
AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,...    28   8.9  
AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,...    28   8.9  

>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score =  262 bits (643), Expect = 2e-70
 Identities = 120/166 (72%), Positives = 137/166 (82%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR   DI++EG N SAEEADEGTD 
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 259 AVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXPDXXEVFXTNMNKVM 438
             ESGVD+VLNHRL E +AFGDKKSYTLYLKDYM           PD  ++F TNMNK M
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAM 120

Query: 439 KDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTXIPIMMFFKHG 576
           KDILGRFKELQFFTGESMDCDGMVA++EYR+ +G  +P++MFFKHG
Sbjct: 121 KDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHG 166


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score =  260 bits (638), Expect = 8e-70
 Identities = 119/166 (71%), Positives = 136/166 (81%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR   DI++EG N SAEEADEGTD 
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 259 AVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXPDXXEVFXTNMNKVM 438
             ESGVD+VLNHRL E +AFGDKKSYTLYL DYM           PD  ++F TNMNK M
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKKVLAKLEEKSPDQVDIFKTNMNKAM 120

Query: 439 KDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTXIPIMMFFKHG 576
           KDILGRFKELQFFTGESMDCDGMVA++EYR+ +G  +P++MFFKHG
Sbjct: 121 KDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHG 166


>BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p
           protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 48  MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 105

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 106 -------ILLNILFKETYPF 118


>AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2
           protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin
           conjugating enzyme E2 protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 215 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 272

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 273 -------ILLNILFKETYPF 285


>AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,
           isoform C protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,
           isoform A protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 258
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 259 AVESGVDIVLNHRLVETYAF 318
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,351,079
Number of Sequences: 53049
Number of extensions: 443387
Number of successful extensions: 807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)