Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1g03
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   133   1e-31
U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant respons...    31   0.51 
U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant respons...    31   0.51 
U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant respons...    31   0.51 
AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant respo...    31   0.51 
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score =  133 bits (321), Expect = 1e-31
 Identities = 74/173 (42%), Positives = 101/173 (58%), Gaps = 9/173 (5%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 252
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G+I + G NPSAEE   D+G+
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60

Query: 253 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXPDXXEV--FXTNM 426
           D  VE G+DIVLNH+LVE   + D   +  Y+K +M            D  +V  F   +
Sbjct: 61  DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKI 120

Query: 427 NKVMKDILG--RFKELQFFTGESM---DCDGMVAMMEYRDFDGTXIPIMMFFK 570
              +  +L   RFK L FF GE       +G VA++EYRD DGT +P +M  K
Sbjct: 121 QGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVK 173


>U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform a protein.
          Length = 445

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = -3

Query: 129 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 7
           +++ HL+ +    ++LH++ +E ++  ++ K G +  QL R
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338


>U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform c protein.
          Length = 473

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = -3

Query: 129 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 7
           +++ HL+ +    ++LH++ +E ++  ++ K G +  QL R
Sbjct: 326 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 366


>U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform b protein.
          Length = 475

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = -3

Query: 129 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 7
           +++ HL+ +    ++LH++ +E ++  ++ K G +  QL R
Sbjct: 328 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 368


>AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant response
           protein ODR-4 protein.
          Length = 445

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = -3

Query: 129 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 7
           +++ HL+ +    ++LH++ +E ++  ++ K G +  QL R
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 217  FNPSAEEADEGTDSAVESG-VDIVLNH 294
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 217  FNPSAEEADEGTDSAVESG-VDIVLNH 294
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical
           protein T12A7.1 protein.
          Length = 625

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +1

Query: 64  LQSIKMKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEAD 243
           +Q + M+ +    +G  + +DT    L  EV+YEV  +L     G ++  GF P + +  
Sbjct: 523 VQFVTMRDFLGNQSGGYLNTDTIMENLAREVLYEVPDQLT----GYMKRRGFTPKSRDDP 578

Query: 244 EGTDSAVESGVDIVLNHRLVETYA 315
              DS  +   D ++++ L  T A
Sbjct: 579 WQRDSPPDE-YDPIMDNILSSTQA 601


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,608,496
Number of Sequences: 27780
Number of extensions: 234213
Number of successful extensions: 628
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)