Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f22
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3JID5 Cluster: Cystathionine beta-lyase; n=3; Marinoba...    35   1.9  
UniRef50_Q4H354 Cluster: Transcription factor protein; n=1; Cion...    35   1.9  
UniRef50_Q4WPN2 Cluster: C6 transcription factor, putative; n=6;...    33   5.9  
UniRef50_A1Z7Q5 Cluster: CG18659-PA, isoform A; n=3; Sophophora|...    33   7.8  

>UniRef50_A3JID5 Cluster: Cystathionine beta-lyase; n=3;
           Marinobacter|Rep: Cystathionine beta-lyase -
           Marinobacter sp. ELB17
          Length = 397

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +3

Query: 177 HTASPAHRPARSVRANRAHRQYWGPPPPPANRTGTTCFFT 296
           H+ SP H PA  +  NR HR   G P  P   T T  F T
Sbjct: 4   HSPSPNHHPATRIIHNRRHRDQQGSPYSPVYNTTTYRFDT 43


>UniRef50_Q4H354 Cluster: Transcription factor protein; n=1; Ciona
           intestinalis|Rep: Transcription factor protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 409

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 577 KKKGSESSPAAIFRLAKLRRSYCNERFSGQLHSVN 473
           KK+  E SP  I +L K+RRS  N+R   ++H +N
Sbjct: 92  KKRRRERSPVTINKLKKIRRSKANDRERNRMHGLN 126


>UniRef50_Q4WPN2 Cluster: C6 transcription factor, putative; n=6;
           Trichocomaceae|Rep: C6 transcription factor, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 688

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 111 TSSSYYMILYKLM*INKQSKTLHTASPAHRPARSVRANRAHRQYWGP 251
           + S Y  IL   M +  +   +H   PA+  AR+    +A+R YWGP
Sbjct: 370 SQSEYSKILTLQMDLETRMPYIHRFKPANLSARTAEELQANRGYWGP 416


>UniRef50_A1Z7Q5 Cluster: CG18659-PA, isoform A; n=3;
           Sophophora|Rep: CG18659-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 908

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 207 RSVRANRAHRQYWGPP--PPPANRTGTTCFFTN*SVHVHIGSGGPAHESS 350
           RS++ N  HR+   PP  PPP   T  + +    + H H+ S  P H S+
Sbjct: 601 RSLKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTST 650


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,857,338
Number of Sequences: 1657284
Number of extensions: 13978717
Number of successful extensions: 43947
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43740
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)