Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f22
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.7  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   4.8  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       24   4.8  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 192 AHRPARSVRANRAHRQY 242
           +HRP RS R N A RQ+
Sbjct: 284 SHRPQRSTRKNPAGRQH 300


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 561 KVHLRLYSDSPSYVGRIVMSDLVGNFILLILCHEL 457
           ++ +RLY+D P+      +SDL    +  +L   L
Sbjct: 423 RIFVRLYADYPAECKEFGLSDLAAGVVAPLLASRL 457


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 575 KKGFGKFTCGYIQTRQVTSVV 513
           +KG+GK+T  +I+T   T +V
Sbjct: 5   RKGYGKYTPDHIRTDLCTHIV 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,458
Number of Sequences: 2352
Number of extensions: 15597
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)