Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f22
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145652-1|AAD38627.1|  499|Drosophila melanogaster BcDNA.GH0878...    33   0.44 
AE013599-801|AAF58981.2|  499|Drosophila melanogaster CG18659-PB...    33   0.44 
AE013599-800|AAM68810.2|  908|Drosophila melanogaster CG18659-PA...    33   0.44 
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    31   1.8  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    31   1.8  
AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH1197...    29   7.2  
AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisat...    29   7.2  
AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA...    29   7.2  

>AF145652-1|AAD38627.1|  499|Drosophila melanogaster BcDNA.GH08789
           protein.
          Length = 499

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 207 RSVRANRAHRQYWGPP--PPPANRTGTTCFFTN*SVHVHIGSGGPAHESS 350
           RS++ N  HR+   PP  PPP   T  + +    + H H+ S  P H S+
Sbjct: 192 RSLKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTST 241


>AE013599-801|AAF58981.2|  499|Drosophila melanogaster CG18659-PB,
           isoform B protein.
          Length = 499

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 207 RSVRANRAHRQYWGPP--PPPANRTGTTCFFTN*SVHVHIGSGGPAHESS 350
           RS++ N  HR+   PP  PPP   T  + +    + H H+ S  P H S+
Sbjct: 192 RSLKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTST 241


>AE013599-800|AAM68810.2|  908|Drosophila melanogaster CG18659-PA,
           isoform A protein.
          Length = 908

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 207 RSVRANRAHRQYWGPP--PPPANRTGTTCFFTN*SVHVHIGSGGPAHESS 350
           RS++ N  HR+   PP  PPP   T  + +    + H H+ S  P H S+
Sbjct: 601 RSLKPNAEHRRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTST 650


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 183 ASPAHRPARSVRANRAHRQYWGPPPPP 263
           A+PA  PA+SV      + Y+ PPPPP
Sbjct: 33  AAPAPAPAQSVIYKLPPQHYYPPPPPP 59


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 183 ASPAHRPARSVRANRAHRQYWGPPPPP 263
           A+PA  PA+SV      + Y+ PPPPP
Sbjct: 35  AAPAPAPAQSVIYKLPPQHYYPPPPPP 61


>AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH11973
           protein.
          Length = 800

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 186 SPAHRPARSVRANRAHRQYWGPPPPPANRTGTTCF 290
           SPAH    +   +R  R+ +   PP  +R GT C+
Sbjct: 41  SPAHSQDTAAPTSRPKRRVYALCPPKFHRVGTDCY 75


>AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisate
           1,2-dioxygenase protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +3

Query: 186 SPAHRPARSVRANRAHRQYWGPPPPPANRTGTTCFFTN*SVHVHIGSGGP 335
           S AH P +  +      Q W   PP  N+ G    F    +H   G+G P
Sbjct: 67  SAAHLPFQPFKGAEYFSQNWDEQPPNPNQDGKNVNFVE-GLHTVCGAGDP 115


>AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA
           protein.
          Length = 800

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 186 SPAHRPARSVRANRAHRQYWGPPPPPANRTGTTCF 290
           SPAH    +   +R  R+ +   PP  +R GT C+
Sbjct: 41  SPAHSQDTAAPTSRPKRRVYALCPPKFHRVGTDCY 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,613,015
Number of Sequences: 53049
Number of extensions: 722331
Number of successful extensions: 2389
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)