Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f17
         (178 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    20   9.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    20   9.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            20   9.2  
AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related prote...    20   9.2  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 53   RNEIRSAHCAXRNSDRRRA 109
            R E+R A    RN++RR A
Sbjct: 1100 RAEVRRARNERRNANRRAA 1118


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 77  NERCEFHCDTVCG 39
           +E C F+ D VCG
Sbjct: 478 SELCNFNGDYVCG 490


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 50   CRNEIRSAHCAXRNSDRRR 106
            CR E +SAH       RRR
Sbjct: 1156 CRFEFKSAHHQVLRDRRRR 1174


>AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related protein
           protein.
          Length = 117

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 50  CRNEIRSAHCAXRNSDRRR 106
           CR E +SAH       RRR
Sbjct: 70  CRFEFKSAHHQVLRDRRRR 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,099
Number of Sequences: 2352
Number of extensions: 1845
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 37
effective length of database: 476,955
effective search space used: 10016055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)