Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f16
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   0.79 
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   5.6  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   7.4  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   7.4  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 16  VLSINVLGSFYFKYC*VLFICRNYTLM 96
           V S+ ++ S YF    +LFIC NY L+
Sbjct: 684 VASLGIIASIYFI---ILFICGNYILL 707


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 460 KGPREKKNTYRTFIH*LQT 516
           K  R   NTYRT++H ++T
Sbjct: 368 KKDRWNTNTYRTYLHMIKT 386


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 64  VLFICRNYTLMGSK*VYCYVQI*YDLDG*NLRQVRPSNLPSKR 192
           VL +C  YT      +YCY  I Y++      +  P NL S R
Sbjct: 214 VLVMCLMYTFPLIVILYCYGSIYYEI----FSRTNPRNLESFR 252


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 64  VLFICRNYTLMGSK*VYCYVQI*YDLDG*NLRQVRPSNLPSKR 192
           VL +C  YT      +YCY  I Y++      +  P NL S R
Sbjct: 214 VLVMCLMYTFPLIVILYCYGSIYYEI----FSRTNPRNLESFR 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,049
Number of Sequences: 2352
Number of extensions: 9249
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)