Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f16
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 154 LRQVRPSNLPSKRYD 198
           LRQ  P  LPSK YD
Sbjct: 236 LRQAFPFWLPSKEYD 250


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 154 LRQVRPSNLPSKRYD 198
           LRQ  P  LPSK YD
Sbjct: 236 LRQAFPFWLPSKEYD 250


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 392 PKEGAPHHLNHFRLRVIQILN 454
           P  G PHH +H + + +Q L+
Sbjct: 345 PTMGPPHHHHHHQTQSLQHLH 365


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 41  HFILNIVEYYLFVE 82
           H + NI++YYL +E
Sbjct: 282 HKMKNIIDYYLVLE 295


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 151 FTHLNHIIFAH 119
           FTHLNH  F++
Sbjct: 475 FTHLNHADFSY 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,595
Number of Sequences: 438
Number of extensions: 3290
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)