Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc1f14
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.55 
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    25   2.2  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   5.1  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   8.9  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   8.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 443 LSSCPGPSTMPGRFGRKDDR 384
           L+  PGPS +PG  G K D+
Sbjct: 276 LAGLPGPSCLPGMSGEKGDK 295


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 178 PVVSRQDSSGTLKTTISLGK 237
           P+V   D  GT+K T+S+ K
Sbjct: 116 PIVKLMDEQGTVKETLSINK 135


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
 Frame = +1

Query: 262 PFYLMK------EPPGECELTGATNLMAYYGLVHSYSKFNGKKLKESLSSFLPNLPGIVD 423
           PFYL K      E  G   L   T    Y+  +  Y  +     K +L    PNL  +V 
Sbjct: 142 PFYLTKLNVIAKENNGHLVLGKPTWADVYFAGILDYLNY---LTKTNLLENFPNLQEVVQ 198

Query: 424 GPGQDDNSTLSSVIAKRPI 480
                DN  + + IAKRPI
Sbjct: 199 KVL--DNENVKAYIAKRPI 215


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 433 QDDNSTLSSVIAKRPIGGKELLPLTSAQLAGF 528
           Q  +S    +IAK+P   ++L PLT   L  F
Sbjct: 25  QSVDSASGVLIAKQPSVSEQLFPLTIIHLNDF 56


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 433 QDDNSTLSSVIAKRPIGGKELLPLTSAQLAGF 528
           Q  +S    +IAK+P   ++L PLT   L  F
Sbjct: 25  QSVDSASGVLIAKQPSVSEQLFPLTIIHLNDF 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,985
Number of Sequences: 2352
Number of extensions: 16164
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)